Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq18 123 8e-23 seq22 113 1e-19 >seq18 Length=5350014 Score = 123 bits (136), Expect = 8e-23 Identities = 369/550 (67%), Gaps = 32/550 (6%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| || || ||| | ||||||||||||||| || ||||| ||||| || || || Sbjct 3718392 CGGCATCATTCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGCGG 3718451 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| ||||| || || ||| ||||||||| ||||||||||||| |||| || || Sbjct 3718452 CAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCGTGGCACGGCGAC-GTGTTCG 3718510 Query 255091 -GTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACA 255149 ||| | ||| | | || ||||| |||||| || |||||||||| | | | Sbjct 3718511 AGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCCGCGACCTGTTCC 3718570 Query 255150 CCGCTGTCTGG-TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGG 255205 || | ||| | | | || ||||| ||| || || || | || | |||| ||| Sbjct 3718571 TGGCCCTGTGGATTCCG-GACCTGTTCATGAAGCGGGTCGAGAAGAACGGCGAG---TGG 3718626 Query 255206 AGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAA 255265 | ||||||||| |||||| | ||||| || | |||| | || || |||||||| Sbjct 3718627 ACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGCGAGGAGTTTGAG 3718686 Query 255266 AAACTGTATCTGGAGTACGAGCGTGCCGGCCGGTTC-----GTACGCCAAGTGCCCGCGA 255320 ||||| | |||||||| | ||||| | | || |||| |||| Sbjct 3718687 GCCCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCTCAAGACCGTCAAG-GCCC---- 3718741 Query 255321 AGAAGATCTGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTATT 255378 ||||| | ||| | | || | || | | ||| || ||||| | || ||| | | Sbjct 3718742 AGAAGCTGTGGTATGCCATTCT-CG-AGGCCCAGACCGAGACCGGCAACCCCTTCATGCT 3718799 Query 255379 GCACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCT 255437 | |||| |||||| || |||| | | |||||| ||| || || || ||| ||| Sbjct 3718800 GTACAAGGACCACTGCAACCGCAAGAGC-AACCAAAAGAACCTGGGCACCATCCGCAGCT 3718858 Query 255438 CGAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGCA 255494 | ||||||||||| |||||| |||| || || |||| | ||||| ||||| || | Sbjct 3718859 CCAACCTGTGCACAGAGATT--GTTGAGTAC-TCTGCGCCCGATGAGGTCGCCGTGTGTA 3718915 Query 255495 ACTTGGCGTC 255504 || ||||||| Sbjct 3718916 ACCTGGCGTC 3718925 >seq22 Length=2936705 Score = 113 bits (124), Expect = 1e-19 Identities = 129/172 (75%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | |||| || || ||||| |||| ||||| || | || || ||||| | Sbjct 2568646 CACCTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGT-G 2568704 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| |||||||||||||| |||| ||||| || || |||| ||| |||||||| | Sbjct 2568705 CTTTCTCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCA 2568764 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 |||| |||||| || ||||||||| |||| |||||| ||||| || || Sbjct 2568765 ACGAGCTGATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCT 2568816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335511586680