Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq18 226 4e-54 seq22 84.2 3e-11 >seq18 Length=5350014 Score = 226 bits (250), Expect = 4e-54 Identities = 1186/1859 (64%), Gaps = 77/1859 (4%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || || |||| ||||| | || || |||||||| || |||||||| | Sbjct 3719836 TGAACTGGATCGGCTGGGCAGCCGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTGAGAC 3719777 Query 110391 CTTGTTTCCATGC-GTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 110448 | | ||||| | ||| | ||||| | || |||| |||||| || || | ||| Sbjct 3719776 CCAGCTTCCAGCCCGTAAAG-TGCATGCTGGTGATCTTGCCCATCGTCGG-CTCACGCAT 3719719 Query 110449 GAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GCGCCCCCGTTGTGCCGCCATAT- 110504 | || ||| | ||| |||| |||||||||| ||||| | || | |||||||| | Sbjct 3719718 GTGGATGTTGAGTGACTGCGACT--GGTCAATGAACGCGCCACGGTCG-GCCGCCATCTG 3719662 Query 110505 --CAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATC 110562 |||| | | | | | || ||||| || || || || |||| | || | Sbjct 3719661 CACAAT--CGTGCG-CTGCGAGATCTCCCACACCGTCTTGTACAGCGCCTTGGTTTCGGC 3719605 Query 110563 TGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATC 110622 ||||| | | ||| |||||||| ||||| ||| | | ||| | | |||||| | Sbjct 3719604 AGGGATGTTAGGGATGTTCTGGATCGAACCACCCTCGGCAATGATGCGGTTCTTCATGTT 3719545 Query 110623 CTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAA 110682 | ||||| ||||| || | ||||| |||| || | ||| || | || Sbjct 3719544 GTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCACGGGTTCACGACCTGGAA 3719485 Query 110683 CTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATT 110742 ||| || || || | | | |||||||||| | ||||| || || ||||| || || Sbjct 3719484 CTCGCCAGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTT 3719425 Query 110743 ATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACG 110802 || |||| || || | || || || || ||||| |||||||||| |||||||| || Sbjct 3719424 GTTGCCCAGAATCTGCGACGTCGACGCCGTCGGCATCGGTGCCATCAGCAGACTGTTGCG 3719365 Query 110803 AAGACCCTTCTCCTTGATGCGTTCCTTGAGAA------CATCCCAGTCGTAGTTGAGCTT 110856 | ||| | ||||||||| ||| ||| | |||||||| | | | Sbjct 3719364 GATACCGTGCTCCTTGAT------CTTCAGACGCAGCGCGTCCCAGTCCCACAGGCCCGA 3719311 Query 110857 -GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAA 110915 || | || | |||||||||| ||||| || | || || ||| |||| |||||| Sbjct 3719310 CGGCGTGACGT-CCCACATGTCGAACTGCAGGATGCCCTGCGACACGGGGCTACCCTCGT 3719252 Query 110916 AGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGAT 110975 | | |||| || | | || |||| || | |||| ||||| ||||| | Sbjct 3719251 ACGACGAGTAGGGGCCCTCGATCTCCGCCAGGTCCGACGACGCCGTCAGGGCAGCGTGGT 3719192 Query 110976 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGC 111030 | ||||| || ||||| | || | ||| || || || || || ||| Sbjct 3719191 AGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGCGCCTCGGGCGACTCGAAGGGCATGC 3719132 Query 111031 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 111090 | |||| || ||| | || || ||||| |||||||| | |||||| || | ||| Sbjct 3719131 GCAGCGCCAAAAAGG-----CGTCTGCCAGACCCTGAACACCGACACCAATGGGACGGTG 3719077 Query 111091 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 111147 |||| || || || || ||| ||||| || || || |||||||| || Sbjct 3719076 GCGCAAGTTGCTGTTCCGGGC---CTCGGGCACGGGGTAGAAGTTGACGTCAATGATGCG 3719020 Query 111148 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG 111207 ||| || || ||| | || || | || || || || | | || | | | Sbjct 3719019 GTTCAGGTTGCGTACAACGACCTGGGTCACCTCGTGCAGCTTCTTGAAGTCGTA-GACCT 3718961 Query 111208 AGTCTCTTCATT-GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 111266 || | | | |||| || || ||||| | || |||| || || || || || Sbjct 3718960 CGTTGGTGTAGTCGACAAACGACGGCAGGGCCAGCGACGCCAGGTTACACACGGCGACCT 3718901 Query 111267 CATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCA 111326 |||| | | |||||| | ||| ||||| || | |||||| || || || |||| Sbjct 3718900 CATCGGGCGCAGAGTACTCAACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTGCCCA 3718841 Query 111327 AATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 111386 ||||||||||| ||||| |||||| |||||||| |||||| |||| | || | Sbjct 3718840 GGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCGG 3718781 Query 111387 TCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT- 111444 |||| ||||| | | |||||| || | ||| | | || | | || | | || || Sbjct 3718780 TCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCCTTG----ACGGTCTTG 3718725 Query 111445 -GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCG 111502 |||| || |||||| ||||||||| ||| ||||| ||||||||||| || | Sbjct 3718724 AGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAG 3718665 Query 111503 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACC 111562 || | || || || || || || || | || | ||| | || | ||| ||| Sbjct 3718664 TCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACC 3718605 Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 111622 ||||||||||| ||||| ||||||||||||| || || || | || |||| Sbjct 3718604 CGCTTCATGAACAGGTCCGGAATCCACAGGGCCAGGAACAGGTCGCGGGCGCGCACCTCC 3718545 Query 111623 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 111682 || | || ||||| || | || |||||||| | | || ||||||| ||||| Sbjct 3718544 TCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGCCGTGCCACGGCTCG 3718485 Query 111683 AGATAGACTGC-GATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCG 111734 || |||| ||| || | || ||| | | ||||| || | |||||||| | Sbjct 3718484 AGGTAGA-TGCAGAAGGCACCGGGGCGCTTGTTGCCGCCC----TGGTCGACATAGCGGG 3718430 Query 111735 CTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCC 111794 | ||| ||| || || || ||||| ||||| || || | || || || || || Sbjct 3718429 CGGTGTTGTTGAACACACGCAGCATGGGAATGATGCCGTTGGACGTGCCGTTAGTGCCGG 3718370 Query 111795 GAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 111854 ||| || |||| | | |||| || || |||||||| || ||| || Sbjct 3718369 CAATGTAGGAGCCCGTGGCGCGGATGCGGTGGACGTTCAGGCCAATACCACCGGCCGTCT 3718310 Query 111855 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 111914 | ||||| || ||| | | || || | ||||| || | || ||| |||||| Sbjct 3718309 TGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGA 3718250 Query 111915 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTT 111973 || ||| ||||| || ||||| ||| || || || || || || ||||| || || Sbjct 3718249 TGTCGACGAGGAAACACGAGGACAGCTG-GGCCTGCGGGGTGCCGGCGTTGAAAAGCGTC 3718191 Query 111974 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 112032 || | || || |||| | || | | |||||| | || ||| ||||| | |||| || Sbjct 3718190 GGCGAGGCATGCGTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAATGACACGCTC 3718132 Query 112033 AATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCAT 112092 ||||| || || |||||||| || || ||||||| ||||| ||| ||| || | Sbjct 3718131 AATGTTGTCGCCCCAGATGCCGACAGCCACACGCATGATCATGTGCTGAGGGCGCTCGAC 3718072 Query 112093 GAGGATGCCATCGAGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 | |||| |||||| |||| |||||| ||| ||||| |||| |||||||| Sbjct 3718071 AATTTTGCCGTCGAGC--TTGAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTA 3718015 >seq22 Length=2936705 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| |||||||| || || || || || || || |||||| || || Sbjct 2568808 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCC 2568749 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || |||||||||| ||| | || | | |||| | ||| ||||||||| Sbjct 2568748 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGAGAAAGCACCGCTGAAGAAGAT 2568689 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 |||||| || || || |||| || || | ||| |||| Sbjct 2568688 ACCCTCGACGGCAGCGAAAGCAACCAGACGCTGGGCAAAGG 2568648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031811590400