Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq19 138 3e-27 seq22 87.8 5e-12 >seq19 Length=4558656 Score = 138 bits (152), Expect = 3e-27 Identities = 176/237 (74%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || || || ||||| || || || || | Sbjct 3387790 TTTGCATACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGT 3387849 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || ||||| ||||| || || ||||||||||| || || ||||| | Sbjct 3387850 AATCAGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGT 3387909 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 |||| || || || || || |||||||| || ||| || ||||| ||||| | || | | Sbjct 3387910 CAGGCGGGATACCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCAATAGTGTC-GCT 3387967 Query 140682 GGT-TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | || || || || |||| ||||| || || || || || || ||||||||||| Sbjct 3387968 GCTCTCCACCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 >seq22 Length=2936705 Score = 87.8 bits (96), Expect = 5e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || ||| || || || || || || || Sbjct 228265 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 228206 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || || |||||||| || || || || ||||| || Sbjct 228205 AAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGG 228146 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || ||||| || || | || || ||| || Sbjct 228145 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCAC 228086 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || || || || || || || || ||||||||||| Sbjct 228085 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253934059272