Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq18 311 9e-80 seq12 156 5e-33 >seq18 Length=5350014 Score = 311 bits (344), Expect = 9e-80 Identities = 534/773 (69%), Gaps = 4/773 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || || | || ||| || ||| || ||||||| Sbjct 3718081 CCTCAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACAACATTGAGCGTGTC 3718140 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| ||| ||| | | |||| ||| ||||| ||| |||| || || ||| Sbjct 3718141 ATTGAGACCTACAACTACATGTCCAACAAGTTCTTCACGCATGCCTCGCCGACGCTTTTC 3718200 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 ||||| || || || | ||| |||| || ||||| || | || ||||| ||| Sbjct 3718201 AACGCCGGCACCCCGCAGGCCCAGCTGTCCTCGTGTTTCCTCGTCGACATCAAGGACGAC 3718260 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || ||||||||||| ||||||||| ||| ||| ||||||||| | | ||| Sbjct 3718261 AGCATTGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGACGGCCGGT 3718320 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||| || | || || | || |||| || | ||| | || || || | Sbjct 3718321 GGTATTGGCCTGAACG--TCCACCGCATCCGCGCCACGGGCTCCTACATTGCCGGCACTA 3718378 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 ||||| || | || ||| | || ||||| || || ||||||||||| ||||| || | Sbjct 3718379 ACGGCACGTCCAACGGCATCATTCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTATG 3718438 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 || ||||||| || |||||| || | ||| ||||||||||||||||||||||| Sbjct 3718439 TCGACCAGGGCGGCAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCGTGGCACG 3718498 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | ||||| ||||| ||||| ||| || || | || ||| ||||| || Sbjct 3718499 GCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCC 3718558 Query 53658 GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 | |||||||| || ||||||||||||||||| |||||| | ||| |||||| ||| Sbjct 3718559 GCGACCTGTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGGGTCGAGAAGAACG 3718618 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 |||||| ||| |||||||| ||||||||||||||||| || |||||| |||| Sbjct 3718619 GCGAGTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGCGAGG 3718678 Query 53778 AGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGG 53837 ||||| | | |||| || ||||| ||||||| | |||| ||||||| Sbjct 3718679 AGTTTGAGGCCCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCTCAAGACCGTCAAGG 3718738 Query 53838 CGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGT 53897 | | || | ||| |||| || ||| || |||| ||||| || | || | |||| Sbjct 3718739 CCCAGAAGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACCGGCAACCCCTTCATGC 3718798 Query 53898 GCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 |||||||| |||| ||||||||||| |||||| | ||| |||| Sbjct 3718799 TGTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTGGGCACCATC 3718851 Score = 134 bits (148), Expect = 2e-26 Identities = 310/454 (68%), Gaps = 25/454 (6%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| ||||| |||| || ||||| || ||||||||| | ||||| |||||||| Sbjct 3719365 CGCAACAGTCTGCTGATGGCACCGATGCCGACGGCGTCGACGTCGCAGATTCTGGGCAAC 3719424 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| |||||| |||||||||||| |||||| || || || ||| Sbjct 3719425 AACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAGCGCCGTGTGCTGGCTGGCGAG 3719484 Query 55604 TT---TGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660 || ||| || ||| | || ||||||||||| | || |||| Sbjct 3719485 TTCCAGGTCGTG---AACCCGTGGCTGCTCAAGGACCTGGTCGACATGGGTCTGTGGTCG 3719541 Query 55661 CCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCG-TCCAGA--ATCTGGAGA 55715 | || |||| || || | ||| || ||| ||| || |||||| ||| | Sbjct 3719542 GACAACATGAAGAACCGCATCAT-TGCCGA--GGGTGGTTCGATCCAGAACATCCCTAAC 3719598 Query 55716 TTCCTCTGC--GTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG---AAGAG 55770 ||| |||| ||||| | | ||| ||||||||||||||| | ||| | || Sbjct 3719599 ATCC-CTGCCGAAACCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCGCAGCGCACGAT 3719657 Query 55771 TCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 | || | ||| || || ||||| |||| ||| |||||||| ||||| || ||||| Sbjct 3719658 TGTG---CAGATGGCGGCCGACCGTGGCGCGTTCATTGACCAGTCGCAGTCACTCAACAT 3719714 Query 55831 CTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGG-TGGAAGA 55889 | |||| | || | ||| |||| | | | |||||| |||||||| |||||| Sbjct 3719715 CCACATGCGTGAGCCGACGATGGGCAAGATCACCAGCATGCAC-TTTACGGGCTGGAAGC 3719773 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||| ||||||||||| |||||||| ||||| || Sbjct 3719774 TGGGTCTCAAGACGGGCATGTACTACCTGCGCAC 3719807 >seq12 Length=5490615 Score = 156 bits (172), Expect = 5e-33 Identities = 221/307 (72%), Gaps = 8/307 (3%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 ||||| |||||||||||||||| ||| |||||||| |||||||| |||||| | |||| Sbjct 4779838 AGGCGCGTGAAAATGTAACGAGCGCTGGCAGCATCAGAGCCACCAGAAAGACGAGAACCG 4779897 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | ||||| ||||| | ||| | |||||||| || |||||| |||| |||| | Sbjct 4779898 AAGTTACCACTGGGCTCGAGACAGTTGACGTTGTTGGAACCAACAAAGGTTTGCGCCAGG 4779957 Query 117419 TTGACAATCGTACCTTGGA--GGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCA 117476 ||||||||| || | | || | ||||| ||||| |||| | | ||| | | Sbjct 4779958 CCGACAATCGTCTGATGCAACGACTGG--TCACCGTGGTGGTACGAGGCCAGCTTGGAGA 4780015 Query 117477 CGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGC 117534 | ||| || |||| | ||||||| ||| |||||| ||||||||||| |||| Sbjct 4780016 CCGTGCCAGCGAGCTCAAACACCTTCTGGTCCTTGACGT--AGTTCTTCTTGAAACAGGT 4780073 Query 117535 ATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTT 117594 ||| || ||||||||||| | ||||| | ||| || || ||||| |||||| | Sbjct 4780074 ATAGATGACCTTGCGCTGGCCAGGCTTGAAACCGTCAAGAACAGACGGGATGGAACGCAT 4780133 Query 117595 GATGTCC 117601 | ||||| Sbjct 4780134 GTTGTCC 4780140 Score = 113 bits (124), Expect = 5e-20 Identities = 302/455 (66%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| || || || ||||||||||| |||| ||| ||||||| || ||||| | Sbjct 4779691 CCAGTACCAATACCGTCGGCACCGTTGACGAGAACCATGGGCACAACCGGCGCGTAGTTC 4779750 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 | ||||| | || | || ||||||| || | || || | | || ||| Sbjct 4779751 TTGGGCTCAATAATGCTTCCC-TCATCCACGTTGTTCTCCAGGACAGGCTCATCCATCGG 4779809 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 ||| | || || | | ||| || |||||||| ||||| || | |||||| || Sbjct 4779810 GCTGAAGACACGGCGGGCGAAGGGAGACAGGCGCGTGAAAATGTAACGAGCGCTGGCAGC 4779869 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 ||| |||||| | || || | || || | ||| ||||||||| ||||| ||| Sbjct 4779870 ATCAGAGCCACCAGAAAGACGAGAACCGAAGTTACCACTGGGCTCGAGACAGTTGACGTT 4779929 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCA--GACTCGCTTCA 152172 ||||| || || || | || |||| |||||||| |||| |||| | ||| Sbjct 4779930 GTTGGAACCAACAAAGGTTTGCGCCAGGCCGACAATCGTCTGATGCAACGACTGG--TCA 4779987 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||| |||| | | ||| | || || || | || ||||||| |||| Sbjct 4779988 CCGTGGTGGTACGAGGCCAGCTTGGAGACCGTGCCAGCGAGCTCAAACACCTTCTGGTCC 4780047 Query 152233 GT--CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290 | ||| ||||||||||| ||||| || || |||||||||||| || || |||| Sbjct 4780048 TTGACGTA--GTTCTTCTTGAAACAGGTATAGATGACCTTGCGCTGGCCAGGCTTGAAAC 4780105 Query 152291 CGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 |||| | || || || |||||| || ||||| Sbjct 4780106 CGTCAAGAACAGACGGGATGGAACGCATGTTGTCC 4780140 Score = 104 bits (114), Expect = 3e-17 Identities = 238/353 (67%), Gaps = 4/353 (1%) Strand=Plus/Plus Query 152758 ACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTC 152817 || || || | ||||| || |||||||||||| || ||||| ||||| |||| | Sbjct 4780579 ACTTGCAAGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCGTGATCCTGATCGGCC 4780638 Query 152818 ATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTG 152876 |||||||| || |||| ||||| | | | | | ||| | ||||||| || | Sbjct 4780639 ATGATCATGAGGTGACCATAGCGGA-GACCCTTGGTGTCGGTATAGACCTGCTTGTGCTT 4780697 Query 152877 AAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGT 152936 || || |||| || |||| ||| || ||||| || | ||| | ||| | | | Sbjct 4780698 CAGACCAAGGAACTGCTTGATGTTCTGAATTTCCTTGTTCTTGGTGATCTGGTCGATTGA 4780757 Query 152937 GGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCC 152996 ||||| || || ||| || |||| || ||||| || ||||| |||| || | | | Sbjct 4780758 AGCATCGCGCACGTTGAGCAGCTTACCGCGGAGCGGGAACACACCGATGCGGTCGGGATC 4780817 Query 152997 TACAA-CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAA 153055 | || ||| | |||| |||| ||| | | || ||||||||||| |||| ||| | Sbjct 4780818 GAGAACCGCAC-GACCAGCAACAGCTAAACCACGAGCAGAGTCACCCTCTGTGAGAATGA 4780876 Query 153056 GCGTACAGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTG 153108 |||| || ||||| | | || || ||| |||||||||| |||||||| Sbjct 4780877 GCGTGCACTCGTGGCCGTGCTTTGTGCCAGCCAAGTTGGCGTCAACAAGCTTG 4780929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215835835200