Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq18 141 8e-29 >seq18 Length=5350014 Score = 141 bits (156), Expect = 8e-29 Identities = 274/402 (68%), Gaps = 12/402 (3%) Strand=Plus/Minus Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 |||||||||||| | ||||| ||||| || || || |||| | || ||| Sbjct 544045 CACGTAAAACTGGGCAAACATG---TGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCG 543989 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174 ||||||||||| ||| || ||||||| ||| || || | ||| || | | Sbjct 543988 CGGGTTCCAGGCCGACAGGAGAATGCGCCGGTCAAACGGCGCGTCCTTGAGCTTGCGCAC 543929 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234 ||| || |||||| || || ||| |||| ||||| | | |||| |||| Sbjct 543928 CACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGCATAGTCGGTGTGCGGGTCCTTGTA 543872 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 | | || || || || | ||||||||| ||||| ||||| |||| ||| || || |||| Sbjct 543871 CGCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACCGGGCCCAAGTCGCCGTCCTCCCG 543812 Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 || | ||||||| ||| ||||| || | | || |||||| ||||||||||||| || Sbjct 543811 GTCCGTGAAGCCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGAC 543752 Query 30355 CCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 |||||| | | ||| | || | || || | |||||||||||||||||||| Sbjct 543751 GCCCTTCGCGGCCAGCGTCGTCGACGTCGTCTCGCCGCGCACGAACCACAGCAGCTCCTC 543692 Query 30415 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||| || | |||||| | |||||| |||||||| || Sbjct 543691 GATGACAGCGCGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 543650 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29828 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 29887 ||| |||| || || |||| | |||| | | ||| ||||| |||| || | || ||| Sbjct 544365 ATCGTCAGCGTTGGGAAGGCCCGGGGCACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACG 544306 Query 29888 TTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCG 29947 | || | ||||||||| || || |||| | |||| | | || || | || || Sbjct 544305 TGGTCGACGTAGACGTGCGCATCGCCCATGACGTGGGTCAGCGAGCCGGGCACGAGGTCG 544246 Query 29948 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 30007 |||| | |||| ||||| || ||||| | ||| ||||||||| ||||| || ||| Sbjct 544245 CAGACGCGCGCCAGCATGTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACGCCG 544186 Query 30008 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 || |||||||| | || | |||||||||||| || Sbjct 544185 AGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 544151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310281154208