Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq19 118 9e-22 seq1 93.3 4e-14 >seq19 Length=4558656 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | ||||| | || || || | || Sbjct 3388252 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 3388193 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || ||| Sbjct 3388192 GACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 3388133 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || |||| || || ||| | ||| |||||| Sbjct 3388132 CAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 3388073 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || |||| |||||| |||| |||||||| Sbjct 3388072 ATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGGCAT 3388023 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| |||||| | || || || || ||||| ||||| Sbjct 3387796 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 3387737 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| || ||||| || || || || Sbjct 3387736 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3387677 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || | || ||| | || | ||||| |||||| Sbjct 3387676 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAAC 3387617 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||| ||||| |||| || || Sbjct 3387616 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGCGGCGG 3387570 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | ||||| || || ||||| Sbjct 3388025 CATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAG 3387966 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 3387965 CGACACTATTGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCA 3387906 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | || ||||| || | || || | || |||| |||||||| Sbjct 3387905 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAA 3387846 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || |||| |||| |||| ||||| || Sbjct 3387845 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGTGGTGGTAT 3387795 >seq1 Length=6771991 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || || ||||||||| | || || | || || || | || ||| |||| Sbjct 3549281 TTCGTGAAGACCCTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 3549222 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || || ||||| || ||||| || || || || ||||| | Sbjct 3549221 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 3549162 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| ||||| || ||||| ||| | ||| | || || |||||||| |||||| Sbjct 3549161 ATTTTCGCAGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAG 3549102 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || | || |||| | || |||| ||||| || Sbjct 3549101 GAGTCCACTCTGCACCTGGTGCTCCGCCTGCGCGGTGGTAT 3549061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918269524480