Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq18 138 1e-27 >seq18 Length=5350014 Score = 138 bits (152), Expect = 1e-27 Identities = 240/340 (71%), Gaps = 8/340 (2%) Strand=Plus/Plus Query 34263 TCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCG-- 34320 ||||||||||||||||||||||| | || | |||| | | | || | || | | || Sbjct 543690 TCGAGGAGCTGCTGTGGTTCGTGCGCGGCGAGACGA-CGTCGACGA-CGCTGGCCGCGAA 543747 Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380 ||| || ||||||||||||| |||| || || | || |||||| || ||| ||| | Sbjct 543748 GGGCGTCAAGATCTGGGACGGCAACGGATCGCGCGCGTTCCTGGACCAGATGGGCTTCAC 543807 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 |||||||| ||||||||||||||||||||||| ||||||||| | |||||||| || Sbjct 543808 GGACCGGGAGGACGGCGACTTGGGCCCGGTCTACGGCTTCCAGTGGCGCCACTTTGGCGC 543867 Query 34441 GGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACG 34499 | ||| | || || | | |||||| |||| ||||| | ||||||||| | | Sbjct 543868 CGCGTA-CAAGGACCCGCACACCGACTATGCGGGCCAGGGCGTCGACCAGCTGGCCGAGG 543926 Query 34500 TGAT-CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 || | || | || | | | || | |||| | | || | ||| || |||||| Sbjct 543927 TGGTGCGCAAGCTCAAGGACGCGCCGT-TTGACCGGCGCATTCTCCTGTCGGCCTGGAAC 543985 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 ||| ||| || || | ||||| ||| || || ||||||| Sbjct 543986 CCGCGGGACCTGCCGCAGATGGTGCTGCCGCCCTGCCACA 544025 Score = 138 bits (152), Expect = 1e-27 Identities = 240/340 (71%), Gaps = 8/340 (2%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 ||||||| || || ||| ||||| | || || ||| ||||||||| || ||| | | Sbjct 544025 TGTGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCGCGGGTTCCAGGCCGACAGGAGAA 543966 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG-ATCACGTACTGCAGCTGGTCCGCT 6865 | | | |||| | || | | | || | || | ||| | ||||||||| | Sbjct 543965 TGCGCCGGTCAA-ACGGCGCGTCCTTGAGCTTGCGCACCACCTCGGCCAGCTGGTCGACG 543907 Query 6866 CCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924 ||||| |||| |||||| | | || || | ||| | || |||||||| | |||||| Sbjct 543906 CCCTGGCCCGCATAGTCGGTGTGCGGGTCCTTG-TACGCGGCGCCAAAGTGGCGCCACTG 543848 Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAG 6984 ||| ||||||||||||||||||||||| |||||||| | ||| ||| || |||||| Sbjct 543847 GAAGCCGTAGACCGGGCCCAAGTCGCCGTCCTCCCGGTCCGTGAAGCCCATCTGGTCCAG 543788 Query 6985 AAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC--CGGGACGAGAGCTCCTTG 7042 || | || || |||| ||||||||||||| || ||| || | | || | || | | Sbjct 543787 GAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGACGCCCTTCGCGGCCAGCG-TCGTCG 543729 Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082 | |||| | || | ||||||||||||||||||||||| Sbjct 543728 ACG-TCGTCTCGCCGCGCACGAACCACAGCAGCTCCTCGA 543690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262265521280