Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq19 107 2e-18 seq22 89.7 4e-13 >seq19 Length=4558656 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||| ||| || || || || || |||| || || || |||| || Sbjct 3387587 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCGTCCTC 3387646 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| ||||| || || ||||||||||| | || | || ||| |||||| Sbjct 3387647 AAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 3387706 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || || | ||| | | | || ||| ||||||||| |||| ||||| | | Sbjct 3387707 GATCTTGGACTTCA-CGTTGTCAATGGTGTCGGACGACTCCACCTCCAGGGTGATCGTCT 3387765 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||||||| || || || ||||||||||| Sbjct 3387766 TGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || |||||| ||| || || || || ||||| | ||| || || | Sbjct 3387809 GCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCC 3387868 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| ||||| || || ||||||||||| | || | | ||| || Sbjct 3387869 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTT 3387928 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| || || |||| | | | || ||||| |||||| || | || || Sbjct 3387929 GTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAAT 3387988 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||||||| || || || || || ||||| Sbjct 3387989 GGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 >seq22 Length=2936705 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || || | ||| || || |||| || Sbjct 228246 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCG 228187 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||||||||| || || ||||| ||||| | || | || ||| |||||| | Sbjct 228186 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 228127 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| |||| | | | || ||| ||||| || | ||||| |||| Sbjct 228126 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTG 228067 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||| || || || || || || |||||||| Sbjct 228066 CCCGTGAGGGTCTTGACGAAAATCTGCATCTT 228035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545474357912