Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq18 125 6e-24 >seq18 Length=5350014 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||||||||| ||||| ||||| |||| ||| || || |||| || | |||| Sbjct 543861 AAGTGGCGCCACTGGAAGCCGTAGACCGGGCCCAAGTCGCCGTCCTCCCGGTCCGTGAAG 543802 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||| ||||| || | | || |||||| ||||||||||||| || |||||| || Sbjct 543801 CCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGACGCCCTTCGCG 543742 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 | ||| | || | || || | |||||||||||||||||||| | ||| || Sbjct 543741 GCCAGCGTCGTCGACGTCGTCTCGCCGCGCACGAACCACAGCAGCTCCTCGATGACAGCG 543682 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | |||||| | |||||| |||||||| || Sbjct 543681 CGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 543650 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29600 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACG 29659 ||| |||| || || |||| | |||| | | ||| ||||| || || | || ||| Sbjct 544365 ATCGTCAGCGTTGGGAAGGCCCGGGGCACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACG 544306 Query 29660 TGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCG 29719 ||||| | ||||||||| ||||| |||| | |||| | | || || | || || Sbjct 544305 TGGTCGACGTAGACGTGCGCATCGCCCATGACGTGGGTCAGCGAGCCGGGCACGAGGTCG 544246 Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779 |||| | |||| ||||| || ||||| | ||| ||||||||| |||||||| ||| Sbjct 544245 CAGACGCGCGCCAGCATGTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACGCCG 544186 Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || |||||||| | || | ||||||||||||||| Sbjct 544185 AGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 544151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163081197264