Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq19 113 1e-19 seq22 105 2e-17 >seq19 Length=4558656 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || |||||||||||||| | | ||| | ||||| Sbjct 3387813 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCC 3387872 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||||||| | || ||| || ||||| || Sbjct 3387873 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCC 3387932 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| | || | |||| ||||| || || || ||||| || Sbjct 3387933 TGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAATGGTC 3387992 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||| ||||| | |||||| Sbjct 3387993 TTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| |||| | || | || || Sbjct 3387585 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCGTCC 3387644 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||||||||| | || ||| || ||||| || Sbjct 3387645 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 3387704 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | |||| || ||| || || || || || || Sbjct 3387705 TGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACCTCCAGGGTGATCGTC 3387764 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||| ||||||| ||||| Sbjct 3387765 TTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| || || ||| || ||||||||||| ||| | || | Sbjct 3388262 GAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCG 3388321 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || ||||| || || | ||| ||||| | | || || || Sbjct 3388322 ACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTC 3388381 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | | | || || ||| || ||||| || Sbjct 3388382 CTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGT 3388441 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || |||||||| |||| |||||| Sbjct 3388442 GATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 3388480 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || || || ||||| || ||||||||||| ||| | || | ||||| || Sbjct 3388044 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCC 3388103 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || ||||| || || | ||| ||||| | | || || ||||| || || Sbjct 3388104 AGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 3388163 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | |||| || ||| || || | ||||| || ||| Sbjct 3388164 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGTCTTG 3388223 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||||| |||||| Sbjct 3388224 CCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 >seq22 Length=2936705 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||| || ||||||||||| || | | || | || || Sbjct 228249 AGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCC 228190 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||| ||||| | || ||| || ||||| || Sbjct 228189 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCC 228130 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | |||| || || || || ||||| || || ||| Sbjct 228129 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTT 228070 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 ||||||||||| ||||| ||||| | |||||| || || Sbjct 228069 TTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 228032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820445200104