Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19 161 7e-35 seq22 141 7e-29 seq1 123 2e-23 >seq19 Length=4558656 Score = 161 bits (178), Expect = 7e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||||||| ||||| |||||| ||||||||||| |||| Sbjct 3387570 CCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3387629 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || |||| || |||||||| ||||||||||||| |||||||| || | || Sbjct 3387630 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387689 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||||| | | |||||||||| || |||||| Sbjct 3387690 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACC 3387749 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||||||| ||||| |||||||| |||||||||||||| Sbjct 3387750 TCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 150 bits (166), Expect = 1e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | |||||||||||| ||||| |||||| ||||||||||| || Sbjct 3388022 CATGCCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 3388081 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || || || |||| |||||| || |||| Sbjct 3388082 GCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGG 3388141 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | | | |||||||| | ||| || Sbjct 3388142 GGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTC 3388201 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| |||||| ||||| || ||||||||||| |||||||| ||||| Sbjct 3388202 GACCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 138 bits (152), Expect = 8e-28 Identities = 174/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || ||||||||| |||||| |||||| ||||||||||| Sbjct 3387791 TTGCATACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTA 3387850 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || |||||||| || |||||||||| |||||||| || Sbjct 3387851 ATCAGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTC 3387910 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | ||| ||||| ||| ||||| ||| || ||| | || |||||| | Sbjct 3387911 AGGCGGGATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGT--CAATAGTGTCGCTG 3387968 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| | ||||| ||||| ||||| |||||||| ||||| || |||||| Sbjct 3387969 CTCTCCACCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||||||||||| ||||||||||| ||| ||| ||| |||| ||| Sbjct 3388272 ACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCC 3388331 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||| ||||| || |||| || | || ||||| ||| Sbjct 3388332 AGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 3388391 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | || || ||||| | || || ||||| Sbjct 3388392 ATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTG 3388451 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || ||||||||||| ||||| |||||| || Sbjct 3388452 CCGGTAAGGGTCTTCACAAAGATCTGCATGGTG 3388484 >seq22 Length=2936705 Score = 141 bits (156), Expect = 7e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || |||||||| || ||||||||||| ||||||||||| || | Sbjct 228264 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 228205 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| |||| || |||||||| || |||||||||| ||||| || || | || Sbjct 228204 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGG 228145 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | || ||||| ||| |||||| ||| || ||| | |||||||||| | ||||| Sbjct 228144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT--CGATGGTGTCGGAGCTTTCCA 228087 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | || || || || |||||||||||||| ||||| || ||||| Sbjct 228086 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 >seq1 Length=6771991 Score = 123 bits (136), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||| |||||||||||||||||| || | || ||| |||| || Sbjct 3549081 CACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTC 3549140 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || || |||| |||||||| |||| || | || ||||| ||| Sbjct 3549141 CAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 3549200 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | ||| || ||||||| || || ||| Sbjct 3549201 GATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 3549258 Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329 || || || ||||||||||||||| Sbjct 3549259 TTGCCGGTAAGGGTCTTCACGAAG 3549282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990294702808