Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq22 150 4e-31 seq19 147 5e-30 >seq22 Length=2936705 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || ||||| |||||||| |||||||||||||| ||| Sbjct 228041 CAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGCTCCGAC 228100 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 228101 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAACAG 228160 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| || || | || ||| | || || ||| || Sbjct 228161 CGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTACAACATC 228220 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 228221 CAGAAGGAGAGCACCCTGCACCTGGT 228246 >seq19 Length=4558656 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || || || |||||||||||||| ||| ||| Sbjct 3388021 CAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGCGAC 3387962 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || ||||| || |||||||| Sbjct 3387961 ACTATTGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAGCAG 3387902 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | |||||| | ||||| ||| || Sbjct 3387901 CGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAACATC 3387842 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 3387841 CAGAAGGAGTCCACGCTGCACCTGGT 3387816 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || ||||||||||| |||||||| || ||| Sbjct 3387793 CAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCCGAC 3387734 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||| |||||||| || || ||||| || |||||||| Sbjct 3387733 ACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 3387674 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || || || | || || |||| || ||| || Sbjct 3387673 CGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAACATC 3387614 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 3387613 CAGAAGGAGTCGACGCTCCACCTGGT 3387588 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || |||||||| ||||| || || || Sbjct 3388477 CAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGAT 3388418 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || || || ||||| || Sbjct 3388417 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAG 3388358 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| ||||| || | || || ||| || ||| || Sbjct 3388357 CGCCTGATTTTCGCAGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTACAACATC 3388298 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || |||||||| || Sbjct 3388297 CAGAAGGAGAGCACCCTGCATCTCGT 3388272 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || || || | ||||| || ||| ||| Sbjct 3388249 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCGGAC 3388190 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || || ||||| || Sbjct 3388189 ACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAG 3388130 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || ||||| | || || ||| || ||| || Sbjct 3388129 CGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAACATC 3388070 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 3388069 CAGAAGGAGTCGACGCTCCACCTGGTGTTG 3388040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730829852656