Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq19 179 3e-40 seq22 161 9e-35 seq1 140 3e-28 >seq19 Length=4558656 Score = 179 bits (198), Expect = 3e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | |||||| || ||||| ||||||||| ||||| |||||||| Sbjct 3387570 CCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3387629 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||||||||| || ||||||||||| ||||| | || Sbjct 3387630 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387689 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | |||||| ||||||||| Sbjct 3387690 ATGCCCTCCTTGTCCTGGATCTTGGACTTC-ACGTTGTCAATGGTGTCGGACGACTCCAC 3387748 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || |||||||| ||||| ||||| || ||||| Sbjct 3387749 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 168 bits (186), Expect = 6e-37 Identities = 185/243 (76%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || |||||||| |||||||||||||| ||||| |||||| | Sbjct 3388254 CCACCGCGGAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 3388313 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||| ||||| ||||||||||||||||| | |||| Sbjct 3388314 AGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGA 3388373 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | ||| | | | || || |||||| || Sbjct 3388374 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGAC 3388432 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATGGA 41874 ||| | || || || || || || || ||||| || || ||||||||| | || ||| Sbjct 3388433 CTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCATGGT---GACGGA 3388489 Query 41875 TCT 41877 ||| Sbjct 3388490 TCT 3388492 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| |||||||| || ||||| ||||||||| ||||| |||||| Sbjct 3388025 GCCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 3388084 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| ||||| ||||| ||||||||||| | ||| Sbjct 3388085 CAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGG 3388144 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || ||| ||| | | | ||||| ||||| | Sbjct 3388145 AATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCCGAGGACTCGA 3388203 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| ||| || || || || || || ||||| ||||| |||||||| Sbjct 3388204 CCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 143 bits (158), Expect = 2e-29 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| ||||||||| ||||||||| ||||| || || || Sbjct 3387798 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 3387857 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| || || ||||||||||| ||||| | || Sbjct 3387858 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387917 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | ||||| | || | | | ||||||||| ||||| Sbjct 3387918 ATACCCTCCTTGTCC-TGA-ATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCA 3387975 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || |||||||| ||||| ||||||||||||||| Sbjct 3387976 CCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 >seq22 Length=2936705 Score = 161 bits (178), Expect = 9e-35 Identities = 176/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| ||||| |||||||||||||| ||||| ||||| || Sbjct 228264 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 228205 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| || || ||||||||||||||||| | || Sbjct 228204 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGG 228145 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||| |||| Sbjct 228144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCGGAGCTTTCCA 228087 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || ||||| ||||| || ||||| |||||||||||||| || Sbjct 228086 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 228035 >seq1 Length=6771991 Score = 140 bits (154), Expect = 3e-28 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||||| ||||| ||| |||||| || ||||| ||||| || Sbjct 3549064 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGAC 3549123 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || | ||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 3549124 AGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 3549183 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 3549184 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCCGAGGACTCGA 3549241 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 |||||| || || || || || || || ||||| ||||| Sbjct 3549242 CCTCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 3549281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303861308800