Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq15 109 1e-18 seq17 89.7 1e-12 >seq15 Length=2990856 Score = 109 bits (120), Expect = 1e-18 Identities = 309/469 (66%), Gaps = 8/469 (2%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| ||||||| || || | | || || ||||| | || ||| |||| Sbjct 388252 TTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCTTTC 388193 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | | ||||||| |||||| ||| || ||||||| ||||| | || |||||| Sbjct 388192 TCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAG 388133 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351 | ||| || ||||||||||| || || | | || | | || ||| || | || Sbjct 388132 CTGATCTCGCGTGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGTTCTCTCACCT 388074 Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAA 230408 ||||| | ||| | || ||||| | | |||||| || || || | | Sbjct 388073 GAAGAACCGCC--CCAG-CAAGCAGGTCATTGAGGACATCATTGTCGATGCCGTCAAGAT 388017 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 ||| |||||||| | || ||| | || ||| ||| | ||||||||||| || Sbjct 388016 CGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTGTGCCCTGCTGGGCATGAACGCCACCCT 387957 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| |||||||| || ||||| |||||||| | | || || || || ||||||| Sbjct 387956 GATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTGGTCGCTCTCGGCAACGAGAA 387897 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||| | | | ||||| || | || |||||| ||| || || || ||||| Sbjct 387896 GGTGTACCGCGCCACCAACCCGTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGAC 387837 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||||| ||||| || | || || |||| | | ||||| ||| Sbjct 387836 CAACTTCTTCGAGAAGCGCGTTGGCGAGTACCAGAAGGCCGGTGTCATG 387788 >seq17 Length=2657087 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || |||| ||| |||| || |||||||||||||| || || || | || Sbjct 2462797 GGGGAAGCCCTCAACCTGCTCGTTGTTGATGGCGCGCATCAGGGTGGACTTGCCGGAACC 2462856 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || |||||||||||||| | || || |||||| | | || | |||||| Sbjct 2462857 GTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGCAGGTGGGTCTGGTTCAG 2462916 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||| || |||| || || || || || || | ||||| |||||||| Sbjct 2462917 CAGAATCTTGGCACCGTAGGCAAGGGAGAACGTGCAGTTGCACAGGTCCTCACC 2462970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823742485970