Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq14 104 2e-17 >seq1 Length=9646222 Score = 136 bits (150), Expect = 3e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| |||| ||||||||||||||| ||||| ||||||| | Sbjct 1585306 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1585365 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||||| ||| ||||| || |||| || | ||||||||| ||| Sbjct 1585366 AGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 1585425 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 1585426 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 1585485 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 |||| ||| |||||||||||||| Sbjct 1585486 TCCAAGGTGATGGTCTTGCCGGT 1585508 >seq14 Length=3247589 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | || |||||||| || ||||| ||||| | Sbjct 662753 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 662812 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 662813 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 662872 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 662873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 662932 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||||| || | || ||||| || || ||||| Sbjct 662933 TCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| |||| ||||||||||| || ||||| || || | Sbjct 662525 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 662584 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| ||| | || || | ||||||||| || Sbjct 662585 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 662644 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | | | ||| || | | |||| Sbjct 662645 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACC 662704 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || | || ||||| || || ||||| Sbjct 662705 TCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||||| ||| |||||| || ||||| ||||| Sbjct 662981 CCACCGCGGAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 663040 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| |||||||| ||||| || |||| || | ||| ||||| || Sbjct 663041 AGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGAGGA 663100 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| ||||| | ||| Sbjct 663101 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACC 663160 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || ||||| || ||||| Sbjct 663161 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 663207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259102220604