Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 152 3e-32 seq14 138 7e-28 seq15 118 7e-22 >seq1 Length=9646222 Score = 152 bits (168), Expect = 3e-32 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | ||||||||||| | ||| || || || ||||||||||| ||| Sbjct 1585306 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1585365 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| ||||||||||||||||||||||| || ||||||||||| ||| Sbjct 1585366 AGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 1585425 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | |||| || | || ||||| Sbjct 1585426 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 1585485 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 |||| |||||||| |||||||| || || ||||| ||| Sbjct 1585486 TCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAG 1585524 >seq14 Length=3247589 Score = 138 bits (152), Expect = 7e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | |||||||||||| | || || ||||| ||||||||||||||| Sbjct 662297 CCGCCACGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 662356 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 ||| |||| |||| || | ||||||||| || || || || ||||||||||| | |||| Sbjct 662357 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 662416 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | |||| ||| || || Sbjct 662417 -ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCAC 662475 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || ||||| || || || || || ||||| ||||| Sbjct 662476 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 662523 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || || || | || || || ||||| |||||||||||| Sbjct 662981 CCACCGCGGAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 663040 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| |||||||||||||||||| || ||||| ||||| || Sbjct 663041 AGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGAGGA 663100 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| | ||| ||||| Sbjct 663101 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACC 663160 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || ||||||||||||||||| Sbjct 663161 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 663207 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || ||||||||| | || || ||||| |||||||||||| | Sbjct 662753 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 662812 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| ||||||||| |||||||| || ||||| ||||| ||| Sbjct 662813 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 662872 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | || | || ||||| Sbjct 662873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 662932 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| ||||| ||||| ||||| || || || ||||||||||| Sbjct 662933 TCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||||||| | || || ||||| |||||||| || || Sbjct 662525 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 662584 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || |||| | || || | ||||||||| || || || || ||||||||||| | |||| Sbjct 662585 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 662644 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | || | ||| | || || Sbjct 662645 -ATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCAC 662703 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| ||||| || || || || || || |||||||| Sbjct 662704 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 >seq15 Length=2990856 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||||||| | || || || ||||| ||||||||||| || Sbjct 2730178 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2730237 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || || |||| || | ||||||||| || || || || ||||| ||||| | |||| Sbjct 2730238 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGG 2730297 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | || | | || | |||| ||| || Sbjct 2730298 -ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCAC 2730356 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||||||||| ||||| || || || || ||||||||| Sbjct 2730357 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATC 2730405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071925188640