Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq13 132 1e-25 seq14 109 1e-18 seq16 91.5 3e-13 >seq13 Length=3279759 Score = 132 bits (146), Expect = 1e-25 Identities = 268/397 (68%), Gaps = 18/397 (5%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||| || |||| ||| |||| || ||||| || ||||||||||| || || || || Sbjct 2740957 CTTCCACACATGCTCTTCTACGGCCCGCCCGGTACCGGCAAGACGTCGACGATTCTCGCC 2740898 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||| |||| ||| | ||||| | |||||||||||||| || || Sbjct 2740897 CTCGCCAAGGAGCTGTACGGCCCCGAATTCATGAAGGCCCGCGTGCTCGAGCTCAATGCC 2740838 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCA------AG 254174 || ||||| ||||| | | | | |||||||| ||| ||||| ||| || || Sbjct 2740837 TCCGACGAGCGCGGCATTGCCATTGTCCGCGAAAAGGTCAAGGACTTCGCCCGCATGCAG 2740778 Query 254175 ATGTCGATTTCGTCGT-----TCCAA--CCCGG-----CTGTCCGCCTTTCAAGCTCGTG 254222 || ||| | || || | ||| |||| ||| || || || |||||| | Sbjct 2740777 CTGACGAATCCGCCGCCGGGCTACAAGGCCCGCTACCCCTGCCCCCCCTTTAAGCTCATT 2740718 Query 254223 ATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATG 254282 | || |||||||| || | |||||| ||||| ||| ||| || ||||| || ||| Sbjct 2740717 GTGCTCGACGAGGCCGATTCTATGACGCAGGACGCCCAGAGCGCGCTTCGCCGGACCATG 2740658 Query 254283 GAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATC 254342 ||||| || | | ||||| || |||||| | ||||||||||| || ||||| Sbjct 2740657 GAGACATACAGCAAGATTACGCGCTTCTGCCTGATTTGCAACTACGTCACGCGCATCATT 2740598 Query 254343 GCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 | ||||||||| |||||| |||||| || |||| Sbjct 2740597 GACCCGCTGGCCAGCCGGTGCAGCAAGTTCCGCTTCA 2740561 >seq14 Length=3247589 Score = 109 bits (120), Expect = 1e-18 Identities = 232/341 (68%), Gaps = 18/341 (5%) Strand=Plus/Minus Query 254028 CCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGG 254087 ||||| | ||||||||| | | | ||| || || ||| ||| ||||||| | | Sbjct 2670850 CCCGGTATCGGCAAGACGACCAGTGTGCTGTGCCTCGCGCGACAGCTGCTGGGCGACGCG 2670791 Query 254088 AACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTC 254147 ||| | ||| ||| ||||| ||||| ||||| |||||| ||||| | |||||||| Sbjct 2670790 TACAAG-GAG-GCG-GTGCTGGAGCTCAACGCCAGTGACGAGCGCGGCATCGACGTCGTG 2670734 Query 254148 CGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCG 254207 ||| || |||||| ||| | ||| | | | || | ||||| | || Sbjct 2670733 CGCAACCGCATCAAGGGCTTCGCGCAGAAGAAGGTCACGCTG-------CCGGCGGGGCG 2670681 Query 254208 CCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCC 254267 | |||||||||||||||||||||||| |||| ||||||| | | |||||| || Sbjct 2670680 GCA--CAAGCTCGTGATCCTGGACGAGGCCGACAGCATGACGTCGGGTGCGCAGCAGGCG 2670623 Query 254268 CTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTAC 254327 || ||||| |||||||||| |||| |||||| ||| | | | ||||||| | Sbjct 2670622 CTGCGCCGGACGATGGAGATCTACTCGAACACGACGCGGTTTGCCTTTGCGTGCAACCA- 2670564 Query 254328 GTGTC---GAAGATCATCGCCCCGCTGGCTTCTCGGTGCGC 254365 ||| |||||||| | |||||| || |||||||| Sbjct 2670563 --GTCCAACAAGATCATTGAGCCGCTGCAGTCGCGGTGCGC 2670525 >seq16 Length=2747409 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 254020 ACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGG 254079 |||| || ||||| || ||||||||||| ||||||||||||||||| || | | | Sbjct 761470 ACGGACCGCCCGGCACGGGCAAGACGTCGACCATCCTGGCGCTGGCACGGCGGATCTATG 761411 Query 254080 GCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGG 254139 ||| || || || | || ||||| ||||| ||||| || ||||| ||||| | | Sbjct 761410 GCGCGGCCAATGTGCGGCAGATGGTGCTGGAGCTCAACGCGTCCGACGACCGCGGCATTG 761351 Query 254140 ACGTCGTCCGCGACAAGATCAAGACTTT 254167 |||| || || || |||||||||| || Sbjct 761350 ACGTGGTGCGGGAACAGATCAAGACGTT 761323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766138604992