Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 181 2e-40 seq15 156 6e-33 >seq12 Length=5458371 Score = 181 bits (200), Expect = 2e-40 Identities = 311/446 (70%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || || || || || | | ||||| | || || ||||||| ||| Sbjct 3728682 CAGGGCGGCAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCGTGGCACGGCGAC 3728741 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| ||||||| ||| ||| || |||| || ||| | ||| Sbjct 3728742 GTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCCGCGAC 3728801 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || || ||||||||||||| ||| | | ||| | Sbjct 3728802 CTGTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGGGTCGAGAAGAACGGCGAG 3728861 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| ||| ||||||||| || || ||||| ||| | || |||| ||||| |||||| Sbjct 3728862 TGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGCGAGGAGTTT 3728921 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGT-GAGACGAGTCGATGCACG 97174 |||||| |||| | |||||| | |||||||| | | |||| ||| | || | Sbjct 3728922 GAGGCCCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCTCAAGAC-CGTCAAGGC-CC 3728979 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| |||||| | ||||| | ||| ||| ||||| || | || | ||| || | Sbjct 3728980 AGAAGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACCGGCAACCCCTTCATGCTGT 3729039 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 ||||||| | || ||||| ||||||||| || ||||||||||| |||||| Sbjct 3729040 ACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTGGGCACCATCCGCAGCTCCA 3729099 Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319 | |||||||| || ||||| |||||| Sbjct 3729100 ACCTGTGCACAGAGATTGTTGAGTAC 3729125 >seq15 Length=2990856 Score = 156 bits (172), Expect = 6e-33 Identities = 215/294 (73%), Gaps = 14/294 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||||||||| ||||| | ||| ||| |||| ||| Sbjct 388710 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATCGACCTG 388651 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| ||| |||| ||| | | || ||| || ||| || | ||| | ||| Sbjct 388650 TCCAAGGATCTGCACGACTGGAACAACCGAATGAACGAGGATGAACGCTACTTTGTCTCG 388591 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 |||||| |||| ||||| |||| ||| ||||| || |||||||| || || || || || Sbjct 388590 CACATTCTGGCGTTCTTCGCCGCCTCTGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 388532 Query 125198 ATTCTCTCAAGAGTTGA---CCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAAT 125251 ||| || | ||| ||| | || |||| ||| ||||| ||||| ||||| || Sbjct 388531 CTTC-----AGCGGTGAGGTCCAGGTGCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGAT 388478 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| |||||| | ||||| || | |||||| ||||| |||| ||||| Sbjct 388477 CATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGACACCTACAT 388424 Score = 140 bits (154), Expect = 5e-28 Identities = 351/526 (67%), Gaps = 23/526 (4%) Strand=Plus/Minus Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 || || | ||| || || ||||| | |||| | ||||||| ||||| |||| Sbjct 388315 GTTCCCTGTATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACGAGCAGTCC 388256 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | | ||| | | ||||| || ||||| ||||| ||||| |||||||| ||| | Sbjct 388255 ACCTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCT 388196 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 || | ||||||| ||||| ||||||||||| || |||||||| ||||| | ||| Sbjct 388195 TTCTCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAAC 388136 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAA 125590 ||| | || || || |||||||| || ||| ||||||||| || ||||| || || Sbjct 388135 GAGCTGATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGTTCTCTCAC 388076 Query 125591 CT--ATCTGCGTCCC-GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 || | || ||| | |||| | || || || || |||||| ||| Sbjct 388075 CTGAAGAACCGCCCCAGCAAGCAGGT-CATTGAGGA---------CATCATTGT---CGA 388029 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 |||||| | ||| || || ||||| || ||||| | || || | || | ||||| Sbjct 388028 TGCCGTCAAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTGTGCCCTGCTGGGCAT 387969 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT 125767 |||| || || ||| ||||||| ||||| || || || ||||| ||| || Sbjct 387968 GAACGCCACCCTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTGGTCG---C 387912 Query 125768 GATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATC 125824 | ||| || ||| | ||| ||||| || || || || |||||| | ||| || Sbjct 387911 TCTCGGCAACGAGAAGGTGTACCGCGCCACCAACCCGTTCGACTTCATGGAGAACATCTC 387852 Query 125825 ACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 || | || ||||||||||| ||||||||| || |||||||| Sbjct 387851 CCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGAGTAC 387806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059023998440