Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq12 320 4e-82 seq18 84.2 6e-11 >seq12 Length=5458371 Score = 320 bits (354), Expect = 4e-82 Identities = 1059/1629 (65%), Gaps = 32/1629 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 |||||||| ||| |||| || | | ||| || || || | | | ||| |||| || Sbjct 3728412 TTCACGCATGCCTCGCCGACGCTTTTCAACGCCGGCACCCCGCAGGCCCAGCTGTCCTCG 3728471 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || || | | || |||||||| ||| ||||| |||| ||||| || |||| Sbjct 3728472 TGTTTCCTCGTCGACATCAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGACG 3728531 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 || || | || ||||||| || || || ||||| | | || ||||| | || || Sbjct 3728532 TGCGCCATGATCTCCAAGACGGCCGGTGGTATTGGCCTGAACG-TCCACCGCATCCGCGC 3728590 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 | | |||||| |||||| || || || || | |||||||||| || Sbjct 3728591 CACGGGCTCCTACATTGCCGGCACTAACGGCACGTCCAACGGCATCATTCCCATGCTGCG 3728650 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 |||||| |||| || || | || ||||||||||| || |||||| || || || Sbjct 3728651 TGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGCGGCAACAAGCGCCCCGGTGCCTT 3728710 Query 363846 -TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||| || || |||||||| || | ||| | || ||||| || || || || || | Sbjct 3728711 CTGC-ATCTACCTCGAGCCGTGGCACGGCGACGTGTTCGAGTTCCTCGACCTGCGCAAGA 3728769 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| |||| || || || |||||| || || ||| || | |||| Sbjct 3728770 ACCACGGCAAGGAGGAGGTGCGCGCCCGCGACCTGTTCCTGGCCCTGTGGATTCCGGACC 3728829 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | ||||| |||| || Sbjct 3728830 TGTTCATGAAGCGGGTCGAG--AAGAACGGCGAGTGGACCCTCATGTGCCCCAACGAGTG 3728887 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || || || | || | || || || | || || || ||||| ||||| || Sbjct 3728888 CCCCGGCCTGGCGGACTGCTACGGCGAGGAGTTTGAGGCCCTGTACGAGAAGTACGAGAA 3728947 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 |||||| | | ||||| | || |||||||| |||| |||||| | || | Sbjct 3728948 GGAGGGCCGTGGCCTCAAGACCGTCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGC 3729007 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| ||||| || | |||| ||| ||||||| || |||||||||||| ||| Sbjct 3729008 CCAGACCGAGACCGGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAA 3729067 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACA 364261 ||| || |||| || || | || |||| |||||| || || |||||| |||| ||| Sbjct 3729068 CCAAAAGAACCTGGGCACCA-TCCGCAGCTCCAACCTGTGCACAGAGATTGTTGAGTACT 3729126 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-- 364319 | || ||||| ||| ||||| |||||||| |||||| | || || ||| ||||||| Sbjct 3729127 CTGCGCCCGATGAGGTCGCCGTGTGTAACCTGGCGTCGCTGGCCCTGCCGTCGTTTGTCG 3729186 Query 364320 -------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGC 364370 || || ||| | ||| | || | || | || || ||| | || | Sbjct 3729187 ACTACACCAACGA-GGT--CTACGACTTCAAGAAGCTGCACGAGGTGACCCAGGTCGTTG 3729243 Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCG 364430 ||| |||| || || | || ||| || | || || | || || ||| | Sbjct 3729244 TAC--GCAACCTGAACCGCATCATTGACGTCAACTTCTACCCCGTGCCCGAGGCCCGGAA 3729301 Query 364431 TTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 || |||| || || || |||||| | ||||| ||||| || || |||| ||| | Sbjct 3729302 CAGCAACTTGCGCCACCGTCCCATTGGTGTCGGTGTTCAGGGTCTGGCAGACGCCTTTTT 3729361 Query 364491 GATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550 | ||| ||| | || || ||||| || || || | || || ||| ||||||| || Sbjct 3729362 GGCGCTGCGCATGCCCTTCGAGTCGCCCGAGGCGCGCGAGCTCAACAAGCAGATCTTCGA 3729421 Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTA 364610 || || || || || |||| || |||| || |||| | | | |||| || Sbjct 3729422 GACCATCTACCACGCTGCCCTGACGGCGTCGTCGGACCTGGCGGAGATCGAGGGCCCCTA 3729481 Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670 ||| | || ||||| ||| | |||||||| | | ||||| || | ||| | || Sbjct 3729482 CTCGTCGTACGAGGGTAGCCCCGTGTCGCAGGGCATCCTGCAGTTCGACATGTGGGACGT 3729541 Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730 |||||| || | || ||| ||||||| |||| ||| || | ||| |||| |||| Sbjct 3729542 CACGCCGTCGGGCCTGTGGGACTGGGACGCGCTGCGTCTGAAGATCAAGGAGCACGGTAT 3729601 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 |||||| || | | || || ||||| ||||| || || | ||||| || || || Sbjct 3729602 CCGCAACAGTCTGCTGATGGCACCGATGCCGACGGCGTCGACGTCGCAGATTCTGGGCAA 3729661 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848 ||||||||||||||| || ||||| | ||| | || ||||| || || | || Sbjct 3729662 CAACGAGTGCTTCGAGCC--TTACACGTCCAACATCTACCAGCGCCGTGTGCTGGCTGGC 3729719 Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908 || || | ||| || || || || ||||||| || |||| || |||||| Sbjct 3729720 GAGTTCCAGGTCGTGAACCCGTGGCTGCTCAAGGACCTGGTCGACATGGGTCTGTGGTCG 3729779 Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968 |||| |||||||||| ||||| |||| |||||| | |||||||| || | Sbjct 3729780 GACAACATGAAGAACCGCATCATTGCCGAGGGTGGTTCGATCCAGAACATCCCTAACATC 3729839 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 || | || ||| | | ||||| || || ||||| || || ||| || | | Sbjct 3729840 CCTGCCGAAACCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCGCAGCGCACGATTGTG 3729899 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088 | ||||||||||| || || || || || ||| ||||| | ||| | |||| Sbjct 3729900 CAGATGGCGGCCGACCGTGGCGCGTTCATTGACCAGTCGCAGTCACTCAACATCCACATG 3729959 Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCT 365147 | |||| || | |||| | || |||||| || |||||| ||||| ||||| Sbjct 3729960 CGTGAGCCGACGATGGGCAAGATCACCAGCATGCACTT-TACGGGCTGGAAGCTGGGTCT 3730018 Query 365148 TAAGACAGG 365156 ||||| || Sbjct 3730019 CAAGACGGG 3730027 >seq18 Length=1965226 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 65914 GCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACG 65973 ||||| ||||||| ||||||||||||||| | | ||||| || || || || |||| Sbjct 1087579 GCCTTGACAAGACGACGCTGGATGTAACCCGTTTCGGCAGTCTTGACAGCCGTGTCAATC 1087520 Query 65974 AGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGTAGACCAAGCATA 66033 ||||||||||| || | ||| || ||||| ||||| | ||| |||||| ||| | Sbjct 1087519 AGACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGACGGCGTCAGACCACGCAGA 1087460 Query 66034 AACGAATTTTGAATGTAACCA 66054 | || |||| || | | ||| Sbjct 1087459 TAAGAGTTTTCAACGAAGCCA 1087439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353282714858