Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 1e-14 seq1 86.0 8e-12 >seq16 Length=2747409 Score = 95.1 bits (104), Expect = 1e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGATTTTC 15112 ||||||||||||||||| || | | ||| ||||||||||| ||| || | | Sbjct 532941 AGATTGGCGACAAGTTTGCGTCGCGCCACGGC-CAAAAGGGCACCATTGGCCTGGCGTAC 532999 Query 15113 CCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCC 15172 | ||| || |||||||| || || || |||||| ||||| ||||||||||||||||| Sbjct 533000 CGCCACGAGGACATGCCATTCACGGCCGAAGGCATTACGCCGGACATTATCATCAACCCG 533059 Query 15173 AACTGCATCCCGTCCCGCATGACCAT 15198 || ||| ||||| |||||||| || Sbjct 533060 CACGCCATTCCGTCGCGCATGACGAT 533085 >seq1 Length=9646222 Score = 86.0 bits (94), Expect = 8e-12 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCA-CGTGCGGCATGA 15107 ||||| |||||||||||||| | || || | ||| |||||||| |||| ||||| | Sbjct 8612645 CCCGAAATTGGCGACAAGTTCTCGTCGCGTCACGGC-CAAAAGGGTGTCGTG-GGCATTA 8612588 Query 15108 TTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCA 15167 | || ||| ||||||||||||||| | | || || | ||||||||||||||| | Sbjct 8612587 TCGTCGACCAAGAAGACATGCCCTTTGCTGACTCGGGTCTCGTGCCCGACATTATCATGA 8612528 Query 15168 ACCCCAACTGCATCCCGTCCCGCATGAC 15195 |||| || | |||| ||||| ||||| Sbjct 8612527 ACCCTCACGGTTTCCCTTCCCGAATGAC 8612500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391854794400