Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15 123 2e-23 seq14 109 5e-19 seq1 93.3 4e-14 >seq15 Length=2990856 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || ||||| |||| ||||| ||||||| | Sbjct 2730407 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGC 2730348 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || |||| || || || ||||||||||| || || || || Sbjct 2730347 TCCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGAC 2730288 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || ||||| ||||| ||| | ||||| |||||| | || || ||| Sbjct 2730287 CAACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTAC 2730228 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || |||| | || | || |||| |||| || ||| Sbjct 2730227 AACATCCAGAAGGAGAGCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 2730177 >seq14 Length=3247589 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || || || ||||| | || | Sbjct 662751 ATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGC 662692 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||| |||||||||||||| || || || || Sbjct 662691 GACACTATTGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 662632 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | |||||| ||| || | || ||||||||| Sbjct 662631 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAAC 662572 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || | || |||| |||| || ||| Sbjct 662571 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGTGGTGGT 662524 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| ||||| || || | | Sbjct 663207 ATGCAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 663148 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| ||||||||||| ||||| || || ||| Sbjct 663147 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAA 663088 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || || |||||| || ||| |||||| Sbjct 663087 CAGCGCCTGATTTTCGCAGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTACAAC 663028 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||| | ||| | || | || | ||||| ||| Sbjct 663027 ATCCAGAAGGAGAGCACCCTGCATCTCGTCCTCCGTCTCCGCGGTGGT 662980 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || ||| |||| || || ||||| | || Sbjct 662523 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 662464 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || || || || Sbjct 662463 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 662404 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| ||| || | ||||| |||||| Sbjct 662403 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAAC 662344 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || |||| |||| || ||| Sbjct 662343 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGTGGCGGT 662296 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || | || | || || || || | Sbjct 662979 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 662920 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || || ||| Sbjct 662919 GACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 662860 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| | ||| |||||| Sbjct 662859 CAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 662800 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || | || ||||| ||||||| || Sbjct 662799 ATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGG 662753 >seq1 Length=9646222 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| | || || || || | || || | ||| || |||| Sbjct 1585508 ACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATCGACAATGTCAAGTCC 1585449 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || || ||||| Sbjct 1585448 AAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTGATTTTCGCAGGCAAG 1585389 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| ||||| ||||||| | || || |||||||| ||||| || ||||| | || Sbjct 1585388 CAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAGGAGTCCACTCTGCAC 1585329 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || ||||||| ||| Sbjct 1585328 CTGGTGCTCCGCCTGCGCGGTGGT 1585305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727902806735