Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq17 100 6e-16 seq15 87.8 4e-12 seq16 86.0 1e-11 seq1 86.0 1e-11 >seq17 Length=2657087 Score = 100 bits (110), Expect = 6e-16 Identities = 134/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || |||||| ||||| | ||| | | || || Sbjct 2461566 CACTCGCGCATGCGCGGTCTGTCCGGTGGCCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 2461507 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | ||||||| ||||||| ||||||||||| |||||||| |||||||| || Sbjct 2461506 TC-GTGGCAGCGCCCTCACCTGATCGTCCTCGACGAGCCCACCAACTACCTGGACCGTGA 2461448 Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882 ||||| || ||| || ||| | | |||| || || ||| | |||| || Sbjct 2461447 CTCTCTGGGTGCCCTGTCCAAGGCCCTGAAGAAGTTTGAGGGTGGTGTCATCATCATCTC 2461388 Query 280883 TCAC 280886 |||| Sbjct 2461387 TCAC 2461384 Score = 100 bits (110), Expect = 6e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||| || || || |||| ||||||||||| ||| Sbjct 2462970 GGTGAGGACCTGTGCAACTGCACGTTCTCCCTTGCCTACGGTGCCAAGATTCTGCTGAAC 2462911 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | ||||||||| | || || ||||| ||||||||| || | Sbjct 2462910 CAGACCCACCTGCGCCTGAAGCGTGGCCAGCGCTACGGTCTGTGCGGTCCCAACGGTTCC 2462851 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | || || || || || ||| Sbjct 2462850 GGCAAGTCCACCCTGATGCGCGCCATCAACAACGAGCAGGTTGAGGGCTTCCCCAA-GCA 2462792 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 2462791 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGACTC 2462750 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 1445624 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 1445683 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1445684 CCCGCATCGGGC 1445695 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 2379193 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 2379134 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2379133 CCCGCATCGGGC 2379122 >seq15 Length=2990856 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || |||||||| ||||||||||||||||||||||| || | || || || || | Sbjct 105549 AGTTGGCTCTCTGTCCGGTGGTTGGAAGATGAAGCTGGCGCTGGCGCGTGCTATGCTGCA 105490 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGAC 279800 | ||||| ||||| || || || ||||| || |||||| ||||| Sbjct 105489 GAAGGCCGACGTCCTGCTCCTGGACGAGCCGACTAACCACTTGGAC 105444 >seq16 Length=2747409 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 171595 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 171654 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 171655 CCCGCATCGGGC 171666 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 2154134 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 2154075 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2154074 CCCGCATCGGGC 2154063 >seq1 Length=9646222 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 8923540 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 8923481 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 8923480 CCCGCATCGGGC 8923469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836549785979