Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14 141 2e-28 seq15 113 1e-19 >seq14 Length=3247589 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||| | ||||| || || ||||| || |||||| | Sbjct 662981 CCACCGCGGAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 663040 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| |||||||| | || || |||||||| ||||| |||||||| ||| Sbjct 663041 AGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTG---GTCTGGA 663097 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || | || ||||| || || | ||| ||| || Sbjct 663098 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCG 663157 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 663158 ACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 663207 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||||| || ||||| || | || || || || ||| Sbjct 662333 TCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 662392 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| || || || |||||||| || | |||||||| Sbjct 662393 ATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTG 662452 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || || ||||||||||| || ||||| ||||||||| Sbjct 662453 TCAATGGTGTCGGACGACTCCACCTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACG 662512 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 662513 AAGATTTGCAT 662523 Score = 100 bits (110), Expect = 7e-16 Identities = 167/236 (71%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | | || || || | ||| || || ||||| || |||| Sbjct 662749 CATG-CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 662807 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || || ||||| || || || | || || || ||||| |||||||||||||| | Sbjct 662808 CGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTG---GT 662864 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || || |||||||| || ||| || ||||| || || | || Sbjct 662865 CTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAG 662923 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || | ||| || ||||| || || || ||||||||||| |||||||| Sbjct 662924 GACTCGACCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | |||| || || ||||| || || || | Sbjct 662525 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 662584 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || |||||||| ||||| || | ||| Sbjct 662585 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 662644 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || || ||| || || || || |||| ||||| || || Sbjct 662645 ATACCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCAC 662703 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || ||||| ||||||||||| |||||||| Sbjct 662704 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 >seq15 Length=2990856 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || ||||| | Sbjct 2730178 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2730237 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || |||||||| |||||||| | ||| Sbjct 2730238 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGG 2730297 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| ||| || Sbjct 2730298 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACC 2730357 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || || ||||||||||| |||||||| Sbjct 2730358 TCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 2730404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654112827882