Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq14 105 7e-18 seq1 98.7 1e-15 >seq14 Length=3247589 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||||| || || | |||||| || || || |||||||| || | Sbjct 662296 ACCGCCACGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 662355 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| |||||||||||||||||| | || || ||||||||||| || || Sbjct 662356 CAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGG 662415 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 662416 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCAC 662475 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||| || || ||||| |||||||| Sbjct 662476 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 662523 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||| || || || || ||||||||||| | Sbjct 662524 ACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGA 662583 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || |||||||||||||| ||| | || || ||||||||||| || || Sbjct 662584 AAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGG 662643 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | | ||||| Sbjct 662644 GATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCAC 662703 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || |||||||| ||||| Sbjct 662704 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || || |||||| ||||||| ||||||||||| || || Sbjct 663017 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAA 663076 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||| ||||| |||||||| || || || || || || || ||| || Sbjct 663077 ATCAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 663136 Query 64373 TCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | |||| ||| || || || || | || | |||||||||||| | || || | Sbjct 663137 TCGATGGTAT--CCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCA 663194 Query 64431 CGAAAATTTGCAT 64443 | || || ||||| Sbjct 663195 CAAAGATCTGCAT 663207 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | | ||| || || | |||||| || || || |||||||| || Sbjct 662753 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 662812 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||||||||| || |||| || ||||| ||||| || ||| Sbjct 662813 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 662872 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || || || || Sbjct 662873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 662932 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 662933 TCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 >seq1 Length=9646222 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || || | || || || ||||| |||||||| || | Sbjct 1585305 ACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGA 1585364 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || | ||||||||| || |||| || ||||||||||| || || Sbjct 1585365 CAGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGG 1585424 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || || || || Sbjct 1585425 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 1585484 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | |||||||||||| | || || ||||| Sbjct 1585485 CTCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 1585523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644681334360