Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15 178 1e-39 seq14 167 2e-36 seq1 129 6e-25 >seq15 Length=2990856 Score = 178 bits (196), Expect = 1e-39 Identities = 346/504 (69%), Gaps = 14/504 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || || ||| ||| ||| | Sbjct 387801 TTCTGGTACTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTC 387860 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| | | ||| ||| | |||||| || |||| Sbjct 387861 TCCATGAAGTCGAACGGGTTGGTGGCGCGGTACACCTTCTCGTTGCCGAG-AG--CGACC 387917 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777 ||||| | |||||| |||||||| ||||| ||| ||| ||| || || | ||| Sbjct 387918 AGCAGACGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGGTGGCG---TTCATGCCC 387974 Query 132778 AGCAGACGCACCGG-CAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 ||||| |||| || ||| || ||||| || || |||||||| ||| || ||| Sbjct 387975 AGCAGG-GCACAGGGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCATCGAC 388033 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896 | ||| ||| || | | | ||| || || | | || || ||||| || ||| Sbjct 388034 AATGATGTCCTCAATGACCTGCTTGCTGGGGCGGTTCTTCAGGTGAGAGAACAGCAGGCA 388093 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 ||||||||| |||| |||||||| | || || || |||||| ||| |||| ||| Sbjct 388094 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCC 388153 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||| |||||||| || || ||||| || |||| || |||| || ||||||| Sbjct 388154 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGAGAAAGCACCGCTGAAGAAGAT 388213 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 ||||||||||| |||||||| ||||| |||| | | || |||| | | | || ||| Sbjct 388214 ACCCTCGACGGCAGCGAAAGCAACCAGACGCTGGGCAAAGGTGGACTGCTCGTCGGAGAT 388273 Query 133077 CCAGCGCAGCGCCCATTCGGCCTT 133100 ||| ||| ||||| |||||||| Sbjct 388274 CCACTTCAGAGCCCAGTCGGCCTT 388297 Score = 176 bits (194), Expect = 5e-39 Identities = 205/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| ||| || || | || ||||| | ||||||||| ||| || || Sbjct 388426 GTAGGTGTCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 388485 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| |||||| || || ||| |||||||| || || Sbjct 388486 GCCGTAGAAGCAGCGAGCCTCGGGCACCTGGACCTCACCGCTGAAGCGCTCGACGAGGTT 388545 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||| || ||||||||| || ||||| | |||| || || | ||| Sbjct 388546 CTCGTTGACAATGCCATCAGAGGCGGCGAAGAACGCCAGAATGTGCGAGACAAAGTAGCG 388605 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 || | ||||||| || | ||||||| || |||||||||||||| | |||||| Sbjct 388606 TTCATCCTCGTTCATTCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGGTCGATCTCCTC 388665 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 388666 GGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 388701 Score = 134 bits (148), Expect = 1e-26 Identities = 165/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||||||||||||||||||| | || || || | Sbjct 2730407 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGC 2730348 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 |||||| | | | | | || || |||| ||||| ||||| || |||||| || Sbjct 2730347 TCCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGA 2730289 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | |||||||| ||||| || |||| |||||||| ||||| Sbjct 2730288 CCAACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTA 2730229 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || ||||| |||| ||||| Sbjct 2730228 CAACATCCAGAAGGAGAGC-ACCCTGCACCTGGTCCTGCG 2730190 >seq14 Length=3247589 Score = 167 bits (184), Expect = 2e-36 Identities = 177/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||| || | || |||||| || | Sbjct 662979 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 662920 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| |||||| | |||| Sbjct 662919 GACACCATCGACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACC 662862 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| ||||||||| |||||||| || | |||||||| | |||||||| Sbjct 662861 AACAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACA 662802 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| ||||||| || ||||| ||||| || | || ||| Sbjct 662801 ACATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGGC 662752 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 662523 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 662464 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || || |||| ||||| ||||| || |||||| |||| Sbjct 662463 GACACCATTGACAACG-TGAAGTCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 662406 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| ||||| || |||| || || || |||||||| Sbjct 662405 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACA 662346 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||||||| || ||||||||||| || | ||||| Sbjct 662345 ACATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGTGGCGG 662297 Score = 136 bits (150), Expect = 4e-27 Identities = 164/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| | | Sbjct 663207 ATGCAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 663148 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 663147 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCA 663089 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| ||| ||||| |||||||| |||| |||||||||| ||||||||| Sbjct 663088 ACAGCGCCTGATTTTCGCAGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTACAA 663029 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||| || |||||| | || || ||| Sbjct 663028 CATCCAGAAGGAGAGC-ACCCTGCATCTCGTCCTCCGT 662992 Score = 105 bits (116), Expect = 7e-18 Identities = 158/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||| ||| |||| || ||| || | Sbjct 662751 ATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGC 662692 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | | || | | |||| || || | ||||| ||||| || |||||| ||| Sbjct 662691 GACACTATTGACAATG--TCAAGAGCAAGATTCAGGACAAGGAGGGTAT-CCCGCCTGAC 662635 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | || ||||| ||||| || || | || || || || ||| Sbjct 662634 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTAC 662575 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| | |||||||| |||||||||| Sbjct 662574 AACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCG 662537 >seq1 Length=9646222 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 1585523 TTCGTGAAGACCCTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 1585464 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 1585463 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 1585404 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| ||| |||| |||| |||||||| |||||||||||||||||| Sbjct 1585403 ATTTTCGCAGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAG 1585344 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || ||||| ||||||| || Sbjct 1585343 GAGTCCACTCTGCACCTGGTGCTCCG 1585318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172681208960