Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 302 6e-77 seq12 147 3e-30 >seq1 Length=9646222 Score = 302 bits (334), Expect = 6e-77 Identities = 714/1076 (66%), Gaps = 12/1076 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||||||||| || || | || |||||||| || |||||||||||||| Sbjct 7024759 TCACCGCTGAGGATGGCGGCCTGAACGGCAGCGCCGTATGCAACAGCCTCATCGGGGTTG 7024700 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || || | | || | || || || Sbjct 7024699 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATCAGCTTCTGGATGCGGGGA 7024640 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || || ||||||| ||||| || | || | || || |||||||| | Sbjct 7024639 ATACGGGTGGAACCGCCGACCAGGACGATCTCGTGGACCTGGGACTTGTCGATCTTGGCA 7024580 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || || | || ||||||| |||| ||||| ||| Sbjct 7024579 TCCGTCAGGACACGGTCAACGGGCTGCAGGGTGGAGCGGAACAGGTCCTGGCACAGCTCC 7024520 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || || || || ||||| || | ||| ||| | | || || || Sbjct 7024519 TCGAAGCGGGCACGAGTGATCGACGTGTAGAAGTCGATGCCCTCGAACAGGGAGTCGATC 7024460 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || || || | ||| || | || ||||| || ||||| || || || || Sbjct 7024459 TCGATGGAAGTCTGAGCGGACGACGAAAGGGTGCGCTTGGCACGCTCGCAAGCGGTGCGG 7024400 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | ||| || || ||||| | ||| | | |||||| | || | || || | Sbjct 7024399 AGACGGCGCAGAGCACGGGCGTTGGTGCTGACGTCTTTCCGGTTCTTTCTCTTGAA---T 7024343 Query 7430 TCAGAGA---AGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 ||||||| |||| | ||| | || || || |||||||||| ||| || || Sbjct 7024342 TCAGAGACAAAGTGGTTGACGAGGCGGTTGTCAAAGTCCTCACCACCCAGGTGCGTGTCA 7024283 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || |||| ||||| || ||||| || | |||||| | | || ||| |||||||| Sbjct 7024282 CCGGCAGTCGACTTGACCTCGAAGATGCCCTCCTCAATGGTGAGCAGCGACACATCAAAG 7024223 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 |||||||| ||||| || ||||| || ||||| ||| | || ||||| || || Sbjct 7024222 GTACCACCGCCCAGATCGAAAATCAGGACGTTGCGCTCGCCTTCGACCTTCTTGTCCAGG 7024163 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || || || || || || || || || || ||||| || ||| ||||| ||| Sbjct 7024162 CCGTAGGCAATGGCGGCGGCGGTGGGCTCGTTGATGATACGCAGGACGTTGAGGCCGGCA 7024103 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | ||||| || || || || || || || ||||| || ||||||||||| || Sbjct 7024102 ATGAGACCGGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAATAGGCCGGGACGGTG 7024043 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 || || |||| | | | ||| || || || || ||| | || ||| ||| | Sbjct 7024042 ACAACGGCGTTGTTAATGGTGCCACCCAGGTAGGACTCGGCGGTCTCACGCATCTTGATG 7023983 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 |||||||| || |||||||| || | | ||||| || | || || || || || || Sbjct 7023982 AGAACCATGGAGGAAATCTCCTCCGGGGTGAACTGCTTGTTCTCGCCCTTGAACTCGACC 7023923 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCG 7906 ||||| | ||| || || ||| | | ||||| | | | | ||||| ||| Sbjct 7023922 TCAATGACGGGCTT---GCCACCACGGTCGGCGACCTTGAAGGGGAAGTGCTTCATGTCG 7023866 Query 7907 TCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 | ||||||| |||| | |||||| | || || |||||||| || || || || ||| Sbjct 7023865 GCCTGGACCTCGGGGTCGGCAAACTTGCGGCCAATCAGACGCTTGGCGTCGAAGACCGTG 7023806 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || | ||||||||| || |||||||| || || || || || | || || | Sbjct 7023805 TTCTGGGGGTTCATAGCGACCTGGTTCTTGGCGGCATCACCAATCAACCGCTC---CGTG 7023749 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 ||||| || || ||| | || || || || || || || ||||| || ||||| || Sbjct 7023748 TCCGTGAAGGCCACGAAAGACGGCGTGGTGCGGTTACCCTGGTCATTGGCAATGAT 7023693 >seq12 Length=5458371 Score = 147 bits (162), Expect = 3e-30 Identities = 248/356 (70%), Gaps = 5/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||| ||| || || || ||||| || || || |||| || Sbjct 4352872 TCAAAGTCCTCACCACCCAGGTGGGTGTCACCGGCGGTGGCCAGAACCTCGAAGACGCCC 4352931 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||| | || || ||||| |||||||| ||||| || || | || | | Sbjct 4352932 TGGTCAATCGACAGCAGGGACACATCGAACGTACCGCCACCGAGATCGTA---GACAATG 4352988 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || ||| | | | |||| || || ||||||||||| || || || || || || Sbjct 4352989 ATC-TGGCGCTCGCCGTCGGTCTTGTCCAGGCCGTACGCGATGGCAGCGGCGGTGGGCTC 4353047 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | |||||| || |||||||||||||||| | | ||||| || || || || || Sbjct 4353048 GTTGACAATACGGAGGACGTTCAGGCCAGCAATAATGCCGGCATCCTTGGTGGCCTGGCG 4353107 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || || Sbjct 4353108 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAG 4353167 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || |||| || ||||| |||| |||| ||| || || | ||| |||| Sbjct 4353168 GTAGCCCTCAGCGACCTCCTTCATCTTGGCGAGAATCATGGAGGAGACCTCCTCAG 4353223 Score = 120 bits (132), Expect = 4e-22 Identities = 372/571 (65%), Gaps = 11/571 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT--AGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| || || || ||||| || || | |||| || ||||||| | | | Sbjct 1599557 CAGCTCCTCGAAGCGGGCGCGGGTGATC--TGCAGGGAGAAGTCCTCGCCGTCAAAGAGC 1599500 Query 7301 GAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || || || |||||||| | || ||||| | || | || ||||| || ||||| | Sbjct 1599499 GAGTCGATCTCAATGGTGGCCTGGGTGCCGCTG--GACAGGGTGCGCTTGGCACGCTCGC 1599442 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | ||| || |||||||| | || | | | || ||||| || | Sbjct 1599441 AAGCAGTGCGCAGACGGCGCAGGGCACGGGCGTCGCTGCCCAGGTCCTTCTTCGTCTTGC 1599382 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | | || || | | |||| || || | | || || || | ||||||| | Sbjct 1599381 GCGTGAAGTCCTTCTTGCAGTGCTCCAGCAGGTTGGTGTCAAAGTCCTGGCCACCCAGAT 1599322 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || || || || ||||| |||| ||| || | ||||| | || ||| | Sbjct 1599321 GGGTGTCACCAGCAGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGCAGCGAGA 1599262 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGT 7595 |||| || || || ||||| || || | || || ||||| || | | | ||| Sbjct 1599261 CATCGAATGTGCCGCCACCTAGATCGTAGATCAGGACGTTGCGCTCCTTGGCGGACTTGC 1599202 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | | |||||||| || || || || || || || || || || ||||| || || Sbjct 1599201 CCGAGCCCAGACCGTAGGCAATGGCAGCGGCGGTGGGCTCGTTGATGATACGCAGGACGT 1599142 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | ||||| ||||| | | || || || |||| || || || ||||| ||||||| Sbjct 1599141 TGAGGCCCGCAATGGCACCGGCGTCCTTGGTCGACTGGCGCTGGTTGTCGTTGAAGTAGG 1599082 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||||||||| | ||| || | | ||| ||||| |||| | || || || || | Sbjct 1599081 CCGGGACCGTGATGACGGCCTTCTCGACCTTCTTGCCGATCTTGACCTCGGCAATCTCCT 1599022 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||||| || ||||| | || ||||| Sbjct 1599021 TCATCTTGGTCAGGACCATGGCCGAGATCTC 1598991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132649155960