Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq15 109 4e-19 seq14 98.7 6e-16 >seq15 Length=2990856 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| |||||||||||| | || | || || Sbjct 2730196 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCG 2730255 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || || ||||| |||| | ||||||||||| Sbjct 2730256 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 2730315 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| || | ||||| || | || || || | ||| ||||| Sbjct 2730316 ATCTTCGACTTGAC--AT--TGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGT 2730371 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| |||||||| ||||| || || |||||||| || Sbjct 2730372 TTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 2730407 >seq14 Length=3247589 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| || || ||||| | || |||| || Sbjct 662543 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCA 662602 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || |||||||| |||| | ||||||||||| | Sbjct 662603 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGA 662662 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | || | | ||| || |||| ||| ||||| || Sbjct 662663 ATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAATGGTCTTG 662722 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||| || || |||||||| Sbjct 662723 CCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| ||| | || | || |||||||| || || Sbjct 663011 GTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCT 663070 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || || |||||| | || | ||||||||||| |||||| ||| Sbjct 663071 GCGAAAATCAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 663130 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || | | ||||| | ||| | ||| || || | ||| ||||| || || || || Sbjct 663131 AC----GTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAG 663186 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 |||||||||||||||||||| Sbjct 663187 GGTCTTCACAAAGATCTGCAT 663207 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||| | || |||| |||||||| || || || || Sbjct 662789 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAA 662848 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || |||||| | || | ||||||||||| ||||| |||||| Sbjct 662849 ATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 662908 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || ||||| || || ||||| ||||| || Sbjct 662909 TCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACG 662968 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 662969 AAGATCTGCATA 662980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633524827032