Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq12 136 3e-27 >seq12 Length=5458371 Score = 136 bits (150), Expect = 3e-27 Identities = 273/402 (68%), Gaps = 12/402 (3%) Strand=Plus/Minus Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 |||||||||||| | ||||| ||||| || || || |||| | || ||| Sbjct 551051 CACGTAAAACTGGGCAAACATG---TGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCG 550995 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101 ||||||||||| ||| || ||||||| ||| || || | ||| || | | Sbjct 550994 CGGGTTCCAGGCCGACAGGAGAATGCGCCGGTCAAACGGCGCGTCCTTGAGCTTGCGCAC 550935 Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30161 ||| || |||||| || || ||| |||| ||||| | | |||| |||| Sbjct 550934 CACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGCATAGTCGGTGTGCGGGTCCTTGTA 550878 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 | | || || || || | ||||||||| ||||| || || |||| ||| || || |||| Sbjct 550877 CGCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAAGTCGCCGTCCTCCCG 550818 Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281 || | ||||||| ||| ||||| || | | || |||||| ||||||||||||| || Sbjct 550817 GTCCGTGAAGCCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGAC 550758 Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 |||||| ||| ||| | || | || || | |||||||||||||||||||| Sbjct 550757 GCCCTTCGCGGCCAGCGTCGTCGACGTCGTCTCGCCGCGCACGAACCACAGCAGCTCCTC 550698 Query 30342 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | || || | |||||| | |||||| |||||||| || Sbjct 550697 GATAACAGCGCGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 550656 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29755 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 29814 ||| |||| || || |||| | |||| | | ||| ||||| |||| || | || ||| Sbjct 551371 ATCGTCAGCGTTGGGAAGGCCCGGGGCACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACG 551312 Query 29815 TGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCG 29874 || || | ||||||||| || || |||| | |||| | | || || | || || Sbjct 551311 TGGTCGACGTAGACGTGCGCATCGCCCATGACGTGGGTCAGCGAGCCGGGCACGAGGTCG 551252 Query 29875 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 29934 |||| | |||| ||||| || ||||| | ||| ||||||||| ||||| || ||| Sbjct 551251 CAGACGCGCGCCAGCATGTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACGCCG 551192 Query 29935 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || |||||||| | || | |||||||||||| || Sbjct 551191 AGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 551157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617505379487