Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq15 98.7 8e-16 seq1 86.0 5e-12 >seq14 Length=3247589 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || |||||| ||| || || || ||||||||||| ||| | || Sbjct 662534 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGG 662593 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| ||||| ||||| || || | || | |||||| Sbjct 662594 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCC 662653 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGC-CTCCACCTCCACCGT 48727 ||||| |||||| || ||| | | || || | || ||||||||| | || Sbjct 662654 TTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTC-GCTGCTCTCCACCTCGAGGGT 662712 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||||| || || || ||||||||||| Sbjct 662713 AATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || |||| ||||| || ||||| ||| || || || ||||| || || Sbjct 662297 CCGCCACGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 662356 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| |||||||| ||||| ||||| || || | || Sbjct 662357 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 662416 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || |||| ||||||| Sbjct 662417 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACC 662476 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || ||||| || ||||||| || || || || || ||||| Sbjct 662477 TCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 662523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| || ||||| ||| || || || ||||| || || | ||| Sbjct 662762 AGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGA 662821 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || || || ||||| |||||||| || | ||||| ||||||| Sbjct 662822 CCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCC 662881 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||| ||||||| |||| Sbjct 662882 TTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTA 662941 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 662942 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || |||||||| || || || ||||| || || | ||| |||| |||| ||| Sbjct 663004 ATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 663063 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || || || ||||| |||||||| || | |||| |||||||||||| |||||| Sbjct 663064 CTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTT 663123 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | || |||| ||| ||||| | || || || || || || Sbjct 663124 GGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 663183 Query 48743 CAAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || ||||| |||||||| ||| Sbjct 663184 AAGGGTCTTCACAAAGATCTGCATGGTG 663211 >seq15 Length=2990856 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| || || |||||||| || || || ||||| || || || | ||| Sbjct 2730187 AGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGA 2730246 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| ||||| |||||||| || | || | ||||||| Sbjct 2730247 CCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCC 2730306 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || |||||||| | || Sbjct 2730307 TTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTG 2730366 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || ||||| ||||| | || || || |||||||||||| || Sbjct 2730367 ATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 2730408 >seq1 Length=9646222 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| ||||| || ||||| || || || | || Sbjct 1585315 AGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGG 1585374 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || || || ||||| ||||| || || | ||||| ||||||| Sbjct 1585375 CCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCC 1585434 Query 48669 TTGTC 48673 ||||| Sbjct 1585435 TTGTC 1585439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937511789137