Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq18 132 1e-25 seq16 93.3 1e-13 >seq18 Length=1965226 Score = 132 bits (146), Expect = 1e-25 Identities = 209/297 (70%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| ||||| | ||||||||| || ||||| ||| | || || ||||| Sbjct 1087589 GTCTTCCAGGGCCTTGACAAGACGACGCTGGATGTAACCCGTTTCGGCAGTCTTGACAGC 1087530 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 || ||||| ||||| |||||||| |||| || |||||||| | ||| ||| ||| | Sbjct 1087529 CGTGTCAATCAGACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGACGG-CGTCA 1087471 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749 | || | | | | ||| | |||||||| ||||| ||||||||||| | |||| ||||| Sbjct 1087470 GACCACGCAGATAAGAGTTTTCAACGAAGCCACGGGCCTCGGGCGAGTAGTCGTCCTTGG 1087411 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | || || ||||| || | || || ||||| | || || || || || || ||| Sbjct 1087410 TGAAATGGGGCAGTGTGCGGTACTTGAAGCCGAAAGGAATGCGGCGACCCTCGACAATCT 1087351 Query 302810 GCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 |||| || | | | ||||||||||||| || | ||||||||||||| Sbjct 1087350 GCTGGCCGACCAAAGCCGTCATCTGCGAAATGTTGATGGACGAACCCTTGGAGCCAG 1087294 >seq16 Length=2747409 Score = 93.3 bits (102), Expect = 1e-13 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct 533445 GCACCGTGCGCAATCATACAATCACGCTCCATTTCACCGAACCGCAGACCGCCGTCGCGC 533386 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570 || | |||||| | ||||| || || Sbjct 533385 GCACGACCCTCCACCGGCTGCCGCGT 533360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817241704403