Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 212 6e-50 seq15 105 6e-18 >seq12 Length=5458371 Score = 212 bits (234), Expect = 6e-50 Identities = 984/1540 (64%), Gaps = 45/1540 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 || || || || |||||||| ||||||||||| | | || | ||| ||| ||||| Sbjct 3729736 TTCACGACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGC 3729677 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | ||| | || || ||||| |||| | Sbjct 3729676 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTCGACGCCGTCGGCATCGGTGCCATC 3729617 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || | ||||| | | ||| || || | | |||||||||| Sbjct 3729616 AGCAGACTGTTGCGGATACCGTGCTCCTTGATCTTCAGACGCAGCGCGTCCCAGTCCCAC 3729557 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCT--CGACTGGCGGGAC 147130 | ||| ||||| |||| |||||||||| |||| || | || |||| |||| | Sbjct 3729556 AGGCCCGACGGCGTGACGTCCCACATGTCGAACTGCAGGATGCCCTGCGACA--CGGGGC 3729499 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190 | || || ||| | |||| || ||| || ||||| || | ||| || | Sbjct 3729498 TACCCTCGTACGACGAGTAGGGGCCCTCGATCTCCGCCAGGTCCGACGACGCCGTCAGGG 3729439 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | | | ||| ||||| ||| ||| || ||||| || || ||| || |||| Sbjct 3729438 CAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGCGCCTCGGGCGACTCGA 3729379 Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310 | ||||| ||||| || |||||| || |||| |||||| | |||||| || || || | Sbjct 3729378 AGGGCATGCGCAGCGCCAAAAAGGCGTCTGCCAGACCCTGAACACCGACACCAATGGGAC 3729319 Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATC 147369 | || ||||||| | || |||| | ||| ||| |||| ||||| || Sbjct 3729318 GGTGGCGCAAGTTGCTGTTCCGGGC-CTCGGGCACGGGGTAGAAGTTGACGTCAATGATG 3729260 Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC 147429 ||| ||||| || || || || | || | | || |||| ||| || || | Sbjct 3729259 CGGTTCAGGTTGCGTACAACGACCTGGGTCACCTCGTGCAGCTTCTTGAAGTCGTAGACC 3729200 Query 147430 CCGTCT------TCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 ||| |||||| ||| || || ||| | |||||||| || || ||| Sbjct 3729199 TCGTTGGTGTAGTCGACAA--ACGAC--GG--CAGGGCCAGCGACGCCAGGTTACACACG 3729146 Query 147484 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543 || ||| |||| | ||||| || || || | |||||||||| || ||| Sbjct 3729145 GCGACCTCATCGGGCGCAGAGTACTCAACAATCTCTGTGCACAGGTTGGAGCTGCGGATG 3729086 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 147603 |||| || | || ||||| || || ||||| ||| ||| | |||||| | || Sbjct 3729085 GTGCCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGG 3729026 Query 147604 CCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACC 147660 |||||||||| || | || | || | ||| ||| | ||| || || Sbjct 3729025 TTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCA---CAGCTTCTGGGCCTTGACG 3728969 Query 147661 CGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCG 147720 || | |||||||| || |||||| |||||||| ||||||||| |||||| Sbjct 3728968 GTCTTGAGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGGGCCTCAAACTCCTCGCCG 3728909 Query 147721 TAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780 ||||| || || |||||||| |||| | || ||||| || | |||| | ||| | Sbjct 3728908 TAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTTC 3728849 Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840 | || || ||| ||||| ||||| | |||||| || | || ||||| || | Sbjct 3728848 TCGACCCGCTTCATGAACAGGTCCGGAATCCACAGGGCCAGGAACAGGTCGCGGGCGC-G 3728790 Query 147841 CAA----TCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGT 147895 || |||| | || | ||||| || | || | | | | | | |||| ||| Sbjct 3728789 CACCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACACGTCGCCGT 3728734 Query 147896 GCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACAT 147952 |||| || || | ||||| | | ||||| ||||| |||||||||||||||| Sbjct 3728733 GCCACGGCTCGAGGTAGATGCAGAAGGCACCGGGGCGCTTGTTGCCGCCCTGGTCGACAT 3728674 Query 147953 GGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGG 148012 ||| | ||||||| ||||| |||| |||||| | |||| | | |||||||| | Sbjct 3728673 AGCGGGCGGTGTTGTTGAACACACGCAGCATGGGAATGATGCCGTTGGACGTGCCGTTAG 3728614 Query 148013 TGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-G 148071 || || | | ||| ||| || | ||| ||||| | |||||| || || | Sbjct 3728613 TGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGGTGGACGTTCAGGCCAATACCACCGG 3728554 Query 148072 CCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGT 148129 |||| ||| || || ||||| || | | || ||||||||| || ||||||| Sbjct 3728553 CCGT-CTTGGAGATCATGGCGCA--CGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGT 3728497 Query 148130 CGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG-AG 148188 ||| |||| | | | | |||||||| ||| || || | || | | ||| || | Sbjct 3728496 CGTCCTTGATGTCGACGAGGAAACACGAGGACAGCTG-GGCCTGCGGGGTGCCGGCGTTG 3728438 Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248 ||||| || || || ||||| || || || | ||| | || |||||||| Sbjct 3728437 AAAAGCGTCGGCGAGGCATGCGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAATG 3728378 Query 148249 GCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGT 148308 | || |||| |||||| ||||| | || || ||||||| ||||||||| || Sbjct 3728377 ACACGCTCAATGTTGTCGCCCCAGATGCCGACAGCCACACGCATGATCATGTGCTGAGGG 3728318 Query 148309 CGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCA 148368 || ||| ||| || || || |||||| ||||| |||||||| ||| | ||| Sbjct 3728317 CGCTCGACAATTTTGCCGTCGAGCTTGAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCA 3728258 Query 148369 AAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||||| ||| | || || | ||||| | ||||||| Sbjct 3728257 AAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCG 3728218 >seq15 Length=2990856 Score = 105 bits (116), Expect = 6e-18 Identities = 333/506 (66%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 46770 CGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAG 46829 ||||| |||||| | ||||| ||||||||||| |||| |||| | ||| || Sbjct 388303 CGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACGAGCAGTCCACCTTTGCCCAG 388244 Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889 || |||| || ||||| ||||| || | || || || ||| || |||| Sbjct 388243 CGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCTTTCTCCTCCATC 388184 Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949 || | | || | ||| | ||||| |||||||| ||| |||||| |||||||| Sbjct 388183 TTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCG 388124 Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGA 47008 || ||||| || || ||||| |||||||| || || || || | | | |||| | Sbjct 388123 CGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGTTCT----CTCACCTGAAGAA 388068 Query 47009 GAAATTAAACTCGGACACGATCCTGAG--CATGTTTAGGGAGGCGGTGAGCATCGAAAAG 47066 | | | | || |||| ||| || || || || | ||||| || Sbjct 388067 CCGCCCCAGCAAGCAGGTCAT--TGAGGACATCATTGTCGATGCCGTCAAGATCGAGCAG 388010 Query 47067 GAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTG 47125 ||||| | || | ||| |||||| ||| |||||||||||||||| || || ||| Sbjct 388009 GAGTTCCTGACCGAGGCTCTGCCCTGTGCCCTGCTGGGCATGAACGC-CACCCTGATGAA 387951 Query 47126 CGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTT 47185 | || |||||||| || || || |||||| |||| ||||| ||| ||| | | Sbjct 387950 GCAGTACATTGAGTTCGTCGCCGACCGTCTGCTGGTCGCTCTCGG-CAA-CGAGAAGGTG 387893 Query 47186 TAATGCTC--GTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAAT 47243 || || | || ||||| || || ||| | ||||| || || | ||||| ||||| Sbjct 387892 TACCGCGCCACCAACCCGTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAAC 387833 Query 47244 TTTTTCGAGAAACGAGTCGGAGAGTA 47269 || |||||||| || || || ||||| Sbjct 387832 TTCTTCGAGAAGCGCGTTGGCGAGTA 387807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611086804840