Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq12 163 3e-35 >seq12 Length=5458371 Score = 163 bits (180), Expect = 3e-35 Identities = 282/403 (70%), Gaps = 14/403 (3%) Strand=Plus/Minus Query 147105 CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||||||||||||| | |||||||| ||||||||| |||| ||||||||| || Sbjct 551051 CACGTAAAACTGGGCAAACATGTGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCGCGG 550992 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC-TTAATCTCTTCGATAA 147223 |||||||||||| | | | |||| | || || | || || | || | || Sbjct 550991 GTTCCAGGCCGACAGGAGAATGCGCCGG-TCAAACGGCGCGTCCTTGAGCT-TGCGCA-- 550936 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTT--TGTCCCGCAGTCCACGT 147277 ||||||| |||||||| |||||||||||| | |||| ||| | | |||| || Sbjct 550935 -CCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGCATAGTCGGTGTGCGG--GTCCTTGT 550879 Query 147278 ACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC 147337 || ||| |||||||| | ||||||||||||||| || || |||| ||||||| || | Sbjct 550878 ACGCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAAGTCGCCGTCCTCCC 550819 Query 147338 TGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCA 147397 || || ||||||| | | | || ||| || | || |||| | |||||||||| | Sbjct 550818 GGTCCGTGAAGCCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGA 550759 Query 147398 CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCT 147457 | ||||| |||| ||| | | || ||| ||| || | |||||| |||||||||| Sbjct 550758 CGCCCTTCGCGGCCAGCGTCGTCGACGTCGTCTCGCCGCGCACGAACCACAGCAGCTCCT 550699 Query 147458 CCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | | ||| | | | |||||| | |||||| || || || || Sbjct 550698 CGATAACAGCGCGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 550656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||| | ||| | ||||||| ||||| | ||||||| | | || | || ||| Sbjct 551371 ATCGTCAGCGTTGGGAAGGCCCGGGGCACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACG 551312 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG---CACAAAGTCCCCCGGCTTAAGG 146988 |||| || |||||||||||| || |||| | ||| || || || ||| ||| Sbjct 551311 TGGTCGACGTAGACGTGCGCATCGCCCATGACGTGGGTCAGCGAG---CCGGGCACGAGG 551255 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || ||| | |||| ||||| ||| || || | ||| ||| ||||||||||| || Sbjct 551254 TCGCAGACGCGCGCCAGCATGTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACG 551195 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || ||||||||||| | || | |||||| |||||||| Sbjct 551194 CCGAGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 551157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487861421600