Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq12 123 8e-23 seq15 113 1e-19 >seq12 Length=5458371 Score = 123 bits (136), Expect = 8e-23 Identities = 369/550 (67%), Gaps = 32/550 (6%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| || || ||| | ||||||||||||||| || ||||| ||||| || || || Sbjct 3728630 CGGCATCATTCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGCGG 3728689 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| ||||| || || ||| ||||||||| ||||||||||||| |||| || || Sbjct 3728690 CAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCGTGGCACGGCGAC-GTGTTCG 3728748 Query 255091 -GTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACA 255149 ||| | ||| | | || ||||| |||||| || |||||||||| | | | Sbjct 3728749 AGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCCGCGACCTGTTCC 3728808 Query 255150 CCGCTGTCTGG-TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGG 255205 || | ||| | | | || ||||| ||| || || || | || | |||| ||| Sbjct 3728809 TGGCCCTGTGGATTCCG-GACCTGTTCATGAAGCGGGTCGAGAAGAACGGCGAG---TGG 3728864 Query 255206 AGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAA 255265 | ||||||||| |||||| | ||||| || | |||| | || || |||||||| Sbjct 3728865 ACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGCGAGGAGTTTGAG 3728924 Query 255266 AAACTGTATCTGGAGTACGAGCGTGCCGGCCGGTTC-----GTACGCCAAGTGCCCGCGA 255320 ||||| | |||||||| | ||||| | | || |||| |||| Sbjct 3728925 GCCCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCTCAAGACCGTCAAG-GCCC---- 3728979 Query 255321 AGAAGATCTGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTATT 255378 ||||| | ||| | | || | || | | ||| || ||||| | || ||| | | Sbjct 3728980 AGAAGCTGTGGTATGCCATTCT-CG-AGGCCCAGACCGAGACCGGCAACCCCTTCATGCT 3729037 Query 255379 GCACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCT 255437 | |||| |||||| || |||| | | |||||| ||| || || || ||| ||| Sbjct 3729038 GTACAAGGACCACTGCAACCGCAAGAGC-AACCAAAAGAACCTGGGCACCATCCGCAGCT 3729096 Query 255438 CGAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGCA 255494 | ||||||||||| |||||| |||| || || |||| | ||||| ||||| || | Sbjct 3729097 CCAACCTGTGCACAGAGATT--GTTGAGTAC-TCTGCGCCCGATGAGGTCGCCGTGTGTA 3729153 Query 255495 ACTTGGCGTC 255504 || ||||||| Sbjct 3729154 ACCTGGCGTC 3729163 >seq15 Length=2990856 Score = 113 bits (124), Expect = 1e-19 Identities = 129/172 (75%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | |||| || || ||||| |||| ||||| || | || || ||||| | Sbjct 388256 CACCTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGT-G 388198 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| |||||||||||||| |||| ||||| || || |||| ||| |||||||| | Sbjct 388197 CTTTCTCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCA 388138 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 |||| |||||| || ||||||||| |||| |||||| ||||| || || Sbjct 388137 ACGAGCTGATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCT 388086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335613339455