Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq14 118 9e-22 seq1 93.3 4e-14 >seq14 Length=3247589 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | ||||| | || || || | || Sbjct 662979 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 662920 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || ||| Sbjct 662919 GACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 662860 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || |||| || || ||| | ||| |||||| Sbjct 662859 CAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 662800 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || |||| |||||| |||| |||||||| Sbjct 662799 ATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGGCAT 662750 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| |||||| | || || || || ||||| ||||| Sbjct 662523 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 662464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| || ||||| || || || || Sbjct 662463 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 662404 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || | || ||| | || | ||||| |||||| Sbjct 662403 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAAC 662344 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||| ||||| |||| || || Sbjct 662343 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGTGGCGG 662297 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | ||||| || || ||||| Sbjct 662752 CATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAG 662693 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 662692 CGACACTATTGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCA 662633 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | || ||||| || | || || | || |||| |||||||| Sbjct 662632 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAA 662573 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || |||| |||| |||| ||||| || Sbjct 662572 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGTGGTGGTAT 662522 >seq1 Length=9646222 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || || ||||||||| | || || | || || || | || ||| |||| Sbjct 1585523 TTCGTGAAGACCCTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 1585464 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || || ||||| || ||||| || || || || ||||| | Sbjct 1585463 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 1585404 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| ||||| || ||||| ||| | ||| | || || |||||||| |||||| Sbjct 1585403 ATTTTCGCAGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAG 1585344 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || | || |||| | || |||| ||||| || Sbjct 1585343 GAGTCCACTCTGCACCTGGTGCTCCGCCTGCGCGGTGGTAT 1585303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918296706880