Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq14 102 6e-17 seq15 93.3 3e-14 >seq14 Length=3247589 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| ||||| || || || || ||||| || || || Sbjct 662751 ATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGC 662692 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || | || ||||| || ||| | ||||| || || Sbjct 662691 GACACTATTGACAATGTCAAGAGCAAGA-TTCAGGACAAGGAGGGTATCCCGCCTGACCA 662633 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| ||||| || || || || | || ||| | |||||||| Sbjct 662632 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAA 662573 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 662572 CATCCAGAAGGAGTCCAC 662555 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| ||||| || |||||||| || || || || || | Sbjct 662523 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 662464 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | ||||| || || Sbjct 662463 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 662404 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| || || || |||| || || | ||| |||||| Sbjct 662403 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAAC 662344 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 662343 ATCCAGAAGGAGTCGAC 662327 >seq15 Length=2990856 Score = 93.3 bits (102), Expect = 3e-14 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| ||||| ||||| || || || || | Sbjct 2730407 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGC 2730348 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| || || | ||||| || Sbjct 2730347 TCCGACACCATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATCCCGCCTGA 2730289 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGAT 23784 |||||||| | || ||||| ||||| || || || |||| |||| |||| | || Sbjct 2730288 CCAACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCG--GAC 2730231 Query 23785 TACAACATACAAAAAGAG 23802 |||||||| || || ||| Sbjct 2730230 TACAACATCCAGAAGGAG 2730213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009521729652