Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq14 143 6e-29 seq15 131 4e-25 seq3 104 6e-17 >seq14 Length=3247589 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| || || || || |||| ||||| |||| || || Sbjct 662302 ACGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGT 662361 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || || ||||| || || || ||||| ||||| || || Sbjct 662362 ACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCC 662421 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| |||||| || |||||||| || | ||||| || | Sbjct 662422 CTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACCTCCAG 662481 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||||||||||| || || | ||| | |||||| Sbjct 662482 GGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 662523 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||||| || || |||| |||||||| | | ||| Sbjct 662530 ACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGT 662589 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||| ||||| || || || ||||| ||||| ||||| Sbjct 662590 ACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACC 662649 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| ||| || || ||||| | | ||||| || | Sbjct 662650 CTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAG 662709 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||||||||||| || || | ||| | ||||| Sbjct 662710 GGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 662751 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 || |||||||| || || || || |||| ||||| ||| || || | ||||| || Sbjct 662771 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCC 662830 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||||||| || ||||| || || || |||||||| || ||||| || |||||||| ||| Sbjct 662831 AGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 662890 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 ||||| ||| || ||||||||||| |||| || || || ||||| || |||||| Sbjct 662891 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGTCTTG 662950 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || | || || | ||| | ||||| Sbjct 662951 CCAGTGAGGGTCTTGACGAAGATCTGCAT 662979 >seq15 Length=2990856 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| ||||| || ||| || || |||| ||||| || | | || Sbjct 2730183 ACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGT 2730242 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || || ||||| || || |||||||| ||||| || || Sbjct 2730243 GCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCC 2730302 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| ||| ||||||| || | Sbjct 2730303 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAG 2730362 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || |||||||| | || || | ||| | ||||| || Sbjct 2730363 GGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 2730407 >seq3 Length=21695 Score = 104 bits (114), Expect = 6e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 ||| ||||| || || ||| || | |||||||||||| | |||||||| | | | ||||| Sbjct 4074 TATAATTACAGCTCACGCCATTTTAATGATTTTCTTTATGGTTATGCCTGCTTTAATAGG 4133 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 ||||| || |||| || | |||||| | | |||| || || ||||| || || || Sbjct 4134 AGGTTTTGGTAATTTTTTATTACCTTTATTAGTAGGTGGACCCGACATGGCATTCCCTAG 4193 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 | || ||||||||||||||||| |||| ||| |||| Sbjct 4194 ATTAAATAATATAAGTTTTTGATTGTTACCTCCTAGCTTA 4233 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/103 (82%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCTG 370730 || |||||||||||||||||||| | |||||| ||||| |||||||| || || || | Sbjct 4631 TCTGGATGACCAAAAAATCAGAAAAGATGTTGGAATAAA--ATAGGATCACCACCTCCAG 4574 Query 370731 ATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 || ||||| || |||||||||||||||||| |||||||| Sbjct 4573 CTGTTTCAAAGAAAGAAGTATTAAAATTTCTATCTGTTAAAAC 4531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530909693186