Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 1e-14 >seq16 Length=123879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 200/298 (67%), Gaps = 9/298 (3%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || || |||||||| || ||| | |||||||| ||||||||||| Sbjct 3845 GGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCA 3786 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 ||||| || ||||| ||||| ||||| || | | || || || || ||| || | Sbjct 3785 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGACCTGGACCTCGCCGCTGAAGCGCT 3726 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | || || ||||| |||||||||||| |||||||| || |||| || ||| | Sbjct 3725 CGACGAGGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAGAAAGCCAGGATGTGCGAGA 3666 Query 17406 TGAAATATTTTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATA 17459 || || |||||| | || ||| |||||| | | ||| ||||| | Sbjct 3665 CAAAGTAGCGCTCGTCCTCGTTCAG---GCGGTTGTTCCAGTCGTGCAGATCCTTGGACA 3609 Query 17460 TATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||| | || |||| |||||| || ||| | ||||| || ||||| | ||| || Sbjct 3608 GATCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 3551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542805253760