Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq23 149 7e-31 >seq23 Length=113490 Score = 149 bits (164), Expect = 7e-31 Identities = 282/408 (69%), Gaps = 18/408 (4%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 || |||||| ||||| ||| | | |||||| |||||||| |||| ||| |||||| Sbjct 14257 CGACACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGCACCATTTGGGGGAGGTCCC 14199 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC-TTGATCTCCCCT 145983 ||||||||| || | || | | | | | || |||| | || || | | | Sbjct 14198 GCGGGTTCCACGCCGACAGCAAAATGCGGCGG-TCAAAGGGTGCTTCCTTCAGTTTGCGC 14140 Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTAC 146043 | | || |||||||||||||||||| ||| ||| || | | | |||| |||| Sbjct 14139 ACAACCTCGGCGAGCTGGTCCACGCCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTAC 14080 Query 146044 GCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG 146103 |||| || || || | ||||||||| ||||||||||| || ||||| ||| || | | Sbjct 14079 TCGGCACCAAAATGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGG 14020 Query 146104 TGCCCCAGCCCGGCCC----GGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | ||| |||| | |||||||| | || || |||||| ||||||||||||| Sbjct 14019 T----CAGTGAAGCCCATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTT 13964 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC---CCCCTGATGAACCAGAGCAG 146216 ||||||| | ||| |||| | ||| |||| | || | ||||||||| || || Sbjct 13963 GACGCCCTTTTCGGCGAGCGTGGTCGAG---GTGGTCTCGCCGCGGATGAACCACAGGAG 13907 Query 146217 CTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||||||| ||| | | | ||||||| |||||| |||||||| || Sbjct 13906 CTCTTCGATGACGGCGCGCGTAAAGACCCGCTTGGTTGTCAGCAGAGG 13859 Score = 125 bits (138), Expect = 8e-24 Identities = 219/316 (69%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || || | ||||| ||||| || ||| || ||||| ||||||||| | | |||||||| Sbjct 14658 TATACAGACATCTTCATGGCAATCGCCTTGTAGGGGTTGTAGCCCTCAATCACAAAGTCC 14599 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG-GATCCTGAGCCTGGGAAAGGG 145655 || | | || | || ||| || | || | | |||| ||||| | || || | Sbjct 14598 TCGAGCGTCCAGCCGTCAATG-CCGGCGCCGTCGTTGTTGATCTTGAGCGTTGGGAACGC 14540 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 |||||| | |||||| || ||| | || ||||| | | |||||||||||| Sbjct 14539 CCGGGGAACACGCTCCAGCTGTGTCTCCAGAGCGTCGACGTGATCGGCGTAGACGTGCGC 14480 Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775 ||| |||| ||| ||| | ||| ||||| ||||| || |||| | ||||| Sbjct 14479 GTCGCCCATGACATGGGTCAAGGAGCCGGGGACGAGGTTGCAGACACGGGCCAGCATGTG 14420 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 |||||||| | ||| || |||||||||||||| || || |||||||| | || || Sbjct 14419 TGTCAGCAGAGCGTACGAAGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGACCG 14360 Query 145836 CTGGTACAGCTGGCAG 145851 |||||| ||||||||| Sbjct 14359 CTGGTAGAGCTGGCAG 14344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073613585280