Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq67 120 2e-22 seq86 98.7 8e-16 >seq67 Length=72276 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| |||||||||||||| |||||||||||| ||| ||| |||| || Sbjct 65799 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCG 65858 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| |||||||| || | |||||||||||| Sbjct 65859 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 65918 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||||| | ||| || || || Sbjct 65919 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTA 65978 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || || || ||||| |||||| Sbjct 65979 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 66014 >seq86 Length=56920 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||||||||| |||||| ||| || | || ||| Sbjct 337 ACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGACAGGGTCCGGCCATCTTCC 278 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 277 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 218 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| || || | |||||| |||||| Sbjct 217 ATCTTCGACTTGACGTTGTCAATGGTGTCGGAGCTCTCGACTTCAAGGGTAATGGTCTTG 158 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| || || || ||||| Sbjct 157 CCCGTGAGCGTCTTGACGAAAATCTGCAT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073119929072