Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq211 122 1e-22 >seq211 Length=310440 Score = 122 bits (134), Expect = 1e-22 Identities = 445/685 (65%), Gaps = 20/685 (3%) Strand=Plus/Plus Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280 ||| || || | || ||||| | || |||||| || | | || || || ||||| || Sbjct 29785 AGGGCACTCGTTAGGGCACATGAGCGTCCACTCGCCATTCTTCTCGACACGCTTCATGAA 29844 Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340 || ||||||||||| || || | || ||||| | | | ||||| || || Sbjct 29845 CAGGTCAGGAATCCACAGGGCCAGGAACAGATCGCGGGCGCGGACCTCCTCCTTGCCGTG 29904 Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400 ||||| |||||||||||| | | | || | |||||||| || | ||| || Sbjct 29905 GTTCTTGCGCAGATCGAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT--A 29962 Query 63401 CATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458 || || | ||||| || ||||| || ||||| || | ||| | ||| |||||||| | Sbjct 29963 CAGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTATTGAAC 30022 Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518 || | || ||| || || || ||||| || | || ||||| |||| || || || Sbjct 30023 ACACGCAGCATGGGGATGATGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTACGAGCCC 30082 Query 63519 CTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576 | ||||| || | ||| || || || || || ||| | || ||||| | | Sbjct 30083 GTCGCACGGATGCGGTGGACGTTG--AGGCCGATACCGCCGGCCGTCTTGGAGATCATGG 30140 Query 63577 CGCATCGT-TTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 |||| ||| || | |||||| |||||||| || ||||| || || | |||| | || Sbjct 30141 CGCA-CGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGATGTCGACGAGG 30199 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 || || |||| ||| | | || || || || || | || || || ||||| Sbjct 30200 AAGCACGAGGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAAAGCGTGGGCGAGGCGTGG 30259 Query 63696 GTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CC 63750 || || | || | || | |||| ||||| |||||||| | || | |||| || Sbjct 30260 GTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAATGACACGTTCAATGTTATCGCC 30318 Query 63751 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGT 63810 |||| || || ||||||||||| | ||||||||| || | || || || ||| Sbjct 30319 CCAGATG----CCGACAGCGACACGCATGATCATGTGCTGGGGACGCTCGACGATCTTGC 30374 Query 63811 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63870 || | || | || ||||| || | || || |||||||| || | ||| | Sbjct 30375 CGTCGAGCTTGAGCAGATAGGAACGCTCGAGGGTCTTGAAACCAAAGTACTGGTAGTTGA 30434 Query 63871 AGTCTCGTTCGTAAATAATAACCGA 63895 |||| || ||||| | ||| |||| Sbjct 30435 AGTCGCGGTCGTAGACAATGGCCGA 30459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814198984960