Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 seq379 84.2 2e-11 >seq2 Length=519255 Score = 100 bits (110), Expect = 3e-16 Identities = 167/238 (70%), Gaps = 14/238 (6%) Strand=Plus/Minus Query 99543 CCGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCC-TC--CAG 99599 |||||| || || | |||||||||| ||||||||||| ||||||| || ||| Sbjct 481569 CCGCACCGTCAGGCACGTGTTGAGCATGAGCACGCCGCGCTCGGCCCAGGGAGTCAGCAG 481510 Query 99600 GCAGCCGTGCTGCGGCCGCGGGGTC---------CCGGGGAAGTTCTTCTGCACGGCCGC 99650 || || ||||| ||| |||| | | |||||| ||| |||||| | ||| Sbjct 481509 GCCACCCTGCTGTGGCGGCGGCGGCTGGAATTTGCCGGGGTAGTCCTTCTGGAGGGCGAT 481450 Query 99651 GTAGATGTTCTGGAG-GCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGC 99709 |||||||||| ||| | ||| | | || | || | ||||| ||||| |||| Sbjct 481449 ATAGATGTTCTTGAGCGACGGGGGCGGCTTGATGGGCG-GCTTCACAGAAAAGGCGAGGC 481391 Query 99710 CGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTC 99767 |||||||||| || | | ||||||| || |||||||| | ||||| |||||||| || Sbjct 481390 CGTGGGCCTGGCCATCGTTGTGGTACGGATCCTGGCCGACAATGACCACCTTGACTTC 481333 >seq379 Length=220105 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 47353 ACGAGCGTGGTGAAGCACAGGTTGTGCGCCTGGATGATGCTGGGGTAGAGGCTGGCAAAG 47412 |||||||| ||| ||||||||||||||||||| ||||| |||||||| || || || Sbjct 22374 ACGAGCGTCGTGTAGCACAGGTTGTGCGCCTGCATGATACTGGGGTACAGCGACGCGAAA 22433 Query 47413 TCCAGCACCATGACGGGGTCGACGTGGAAGCCCGACTCGGGCTCCAGGACCTTGGCGCCC 47472 |||||| | ||||| || || |||| | | | ||||| | |||| |||||||| Sbjct 22434 TCCAGCGTCGCCACGGGCTCCTTGTAGAAGTCGCGCACCGGCTCAATGACCGTGGCGCCC 22493 Query 47473 T 47473 | Sbjct 22494 T 22494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440896819144320