Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq395 150 2e-31 >seq395 Length=184196 Score = 150 bits (166), Expect = 2e-31 Identities = 188/255 (74%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561 |||||||| ||||| ||||| ||||| | | | || ||||| ||||||||| Sbjct 28567 CGCCCGTGCTGCCGAAACCGCCGGCGCCGCGCACACTCTCCTCCAGCTGCGCCACCTCCA 28508 Query 5562 CCACATCGGGGAACGCAGCGCGCTCGCAG-ATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620 | || ||||| | || ||||| ||| | |||||| || | |||||||| | Sbjct 28507 CAACGTCGGGCGTCACAATCCGCTC-CAGCACCAGCTGGGCCACGCGGTCGCCGGCGGCC 28449 Query 5621 ACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680 ||| || || || | | || ||||||||||| || | ||||| ||||||||||||| Sbjct 28448 ACCGGAAAGTCCTTCTCGTCGTGGTTGAACAGCAGAACACGCACGTGGCCGCGGTAGTCG 28389 Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740 ||||| || |||||||||||| |||||| ||||||||| | |||||||| ||||| || Sbjct 28388 GCGTCAATGACGCCCGCGCCCGTGTCGATAAAGTGCTTGGCGGCCAGGCCCGAGCGCGGC 28329 Query 5741 GCCACGCGGCCGTAG 5755 || | |||||||||| Sbjct 28328 GCGATGCGGCCGTAG 28314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052135763584