Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq23 111 1e-19 >seq23 Length=113490 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 25797 ||||| ||||| ||| ||| |||||| || |||| ||||||| || || ||| Sbjct 14127 AGCTGGTCCACGCCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTACTCGGCACCAAAA 14068 Query 25798 TACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCC 25857 | | ||||||||| ||||| || || || ||||| || ||||| | || |||||| Sbjct 14067 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGGTCAGTGAAGCCC 14008 Query 25858 CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 25917 ||| ||| | ||| | | || || ||| ||||||||||||| || ||||| |||| | Sbjct 14007 ATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTTTTCGGCG 13948 Query 25918 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 ||| | ||| | || || | || ||||||||| ||||| | ||||||| Sbjct 13947 AGCGTGGTCGAGGTGGTCTCGCCGCGGATGAACCACAGGAGCTCTTCGATGACGGC 13892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135809175536