Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq211 379 5e-100 >seq211 Length=310440 Score = 379 bits (420), Expect = 5e-100 Identities = 1072/1633 (66%), Gaps = 40/1633 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| |||| || | | ||| || || || | | | ||| |||| || Sbjct 30264 TTCACCCACGCCTCGCCCACGCTTTTCAACGCCGGCACGCCCCAGGCCCAGCTGTCCTCG 30205 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | || |||||||| ||| ||||| |||| ||||| || |||| Sbjct 30204 TGCTTCCTCGTCGACATCAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGACG 30145 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 || || | || ||||||| || ||||| || || | | || ||||| | ||||| Sbjct 30144 TGCGCCATGATCTCCAAGACGGCCGGCGGTATCGGCCTCAACG-TCCACCGCATCCGTGC 30086 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 | | |||||| |||||| || || || || | | |||||||| || Sbjct 30085 GACGGGCTCGTACATTGCCGGCACCAACGGCACGTCCAACGGCATCATCCCCATGCTGCG 30026 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 |||||| | || ||||| | ||||| ||||||||||| ||||| || || || Sbjct 30025 TGTGTTCAATAACACTGCTCGCTACGTTGACCAGGGTGGCAACAAGCGTCCTGGTGCCTT 29966 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| || |||||||| || ||||| | || ||||| || || || || || || Sbjct 29965 CTGTATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTCGATCTGCGCAAGAA 29906 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || ||||| | || || || ||||||||| || || ||| || |||||| Sbjct 29905 CCACGGCAAGGAGGAGGTCCGCGCCCGCGATCTGTTCCTGGCCCTGTGGATTCCTGACCT 29846 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACGA 364019 || |||||||| || ||| |||||| ||| | ||| | ||||| |||| Sbjct 29845 GTTCATGAAGCGTGTCGAG------AAGAATGGCGAGTGGACGCTCATGTGCCCTAACGA 29792 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 || || || || | || | |||||||| | | ||||| ||||||||||| || Sbjct 29791 GTGCCCTGGCCTGGCTGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGA 29732 Query 364080 ATCGGAGGGAAA-GGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 |||||| ||| || ||||| || || |||||||| |||| |||||| | Sbjct 29731 GAAGGAGGGCCGCGGCATC--AAGACCGTTAAGGCCCAGAAGCTGTGGTACGCCATCCTC 29674 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | |||| ||||| || | |||| ||| ||||||| || |||||||||||| Sbjct 29673 GAGGCCCAGACCGAGACCGGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAG 29614 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGA 364256 ||||||| || |||| || || || | |||| | ||||| || || |||||| | || Sbjct 29613 AGCAACCAGAAGAACCTGGGCACCATCC-GCAGCTCCAACCTGTGCACGGAGATTGTCGA 29555 Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||| | || || || ||| ||||| || ||||| || ||| | || || ||| |||| Sbjct 29554 GTACTCGGCCCCTGATGAGGTCGCCGTCTGCAACCTGGCTTCGCTGGCCCTGCCGTCGTT 29495 Query 364317 TGTA---------AAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCA 364367 ||| || || ||| | |||| | || | || | || || ||| | Sbjct 29494 TGTCGACTACACCAACGA-GGTC--TATGACTTCAAGAAGCTGCACGAGGTCACCCAGGT 29438 Query 364368 TGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGA 364427 || | |||| || || | ||||| || | || || | || || ||| | Sbjct 29437 TGTTGTCCGCAACCTGAACCGCATCATCGATGTCAACTTCTACCCCGTGCCCGAGGCCAA 29378 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 | || ||||| || ||||| |||||| | ||||| ||||| || ||||| | || Sbjct 29377 GAACAGCAACATGCGCCACCGCCCCATTGGTGTCGGTGTCCAGGGTCTGGCTGATGCCTT 29318 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 || || ||| | || || ||||| || || || | || || ||| ||||||| Sbjct 29317 CCTGGCTCTGCGCATGCCCTTCGAGTCGCCCGAGGCCCGCGAGCTCAACAAGCAGATCTT 29258 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || || ||||| ||||||| |||| || |||| | | |||| | Sbjct 29257 CGAGACCATCTACCACGCCGCCCTGACTGCGTCGTCGGACCTGGCCGAGATTGAGGGCAC 29198 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 ||||| | || ||||| ||| | |||||||| | | ||||| || | ||| | Sbjct 29197 CTACTCGTCGTACGAGGGCAGCCCCGTGTCGCAGGGCATCCTGCAGTTCGACATGTGGGA 29138 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727 ||||| ||| |||| | ||| ||||||| | || ||| ||| | ||| |||| || Sbjct 29137 TGTCAAGCCGTCTGGTCTCTGGGACTGGGACGCCCTCCGTCTCAAGATCAAGGAGCACGG 29078 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 || |||||| || | | || |||||||||||||| || || | ||||| || || Sbjct 29077 TATCCGCAACAGTCTGCTGATGGCTCCCATGCCCACGGCGTCGACCTCGCAGATTCTGGG 29018 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||||||||||||||| || | || ||| | || ||||| || || |||| Sbjct 29017 CAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGCCGTGTGCTGGCCGG 28958 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| || || || || ||||||| || |||| || |||||| Sbjct 28957 CGAGTTCCAGGTCGTGAACCCGTGGCTGCTCAAGGACCTGGTCGACATGGGCCTGTGGTC 28898 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 |||| |||||||||| ||||| |||| ||||| | |||||||| || | Sbjct 28897 GGACAACATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCTAACAT 28838 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC-A 365026 || | || ||| || | ||||| || || ||||| || || || ||| | | | Sbjct 28837 CCCCGCTGAGACCAAGGCTCTGTACAAGACTGTGTGGGAGATCTC---GC-AACGCACAA 28782 Query 365027 TTG---ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083 ||| | ||||| ||||| || ||||| |||||| ||| |||||| | ||| | Sbjct 28781 TTGTGCAGATGGCCGCCGACCGTGGTGCGTTTATCGACCAGTCGCAGTCGCTCAACATCC 28722 Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 |||| | |||| ||| | |||| | || |||||| ||| ||| ||||| | Sbjct 28721 ACATGCGTGAGCCGACCATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTGG 28662 Query 365144 GTCTTAAGACAGG 365156 |||| ||||| || Sbjct 28661 GTCTCAAGACGGG 28649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346385937824