Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq67 111 1e-19 seq86 104 2e-17 seq390 82.4 6e-11 >seq67 Length=72276 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||||| ||| |||||| || ||||||||||||| | Sbjct 65781 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 65840 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| ||| | || || ||||| ||||| || Sbjct 65841 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 65900 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | ||| || | | | | |||||| | ||| Sbjct 65901 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACC 65960 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | |||||||||||| || || || || ||||| ||||||||||| ||| Sbjct 65961 TCAAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 66011 >seq86 Length=56920 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || ||||||||||| || ||||| ||||||| | Sbjct 355 CCGCCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAC 296 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| || ||||| ||| | || || ||||| ||||| || Sbjct 295 AGGGTCCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 236 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | ||| || | | | | |||||| | ||| | Sbjct 235 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCGGAGCTCTCGACT 176 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| ||||| || || || ||||| ||||| ||||||||||| Sbjct 175 TCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCAT 129 >seq390 Length=196699 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || ||||||||||| | || ||| | | ||| Sbjct 27382 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 27441 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || |||| || ||||| ||||| || | |||||| ||||| Sbjct 27442 TCCAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 27501 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | ||||| || ||| |||| ||||||||| Sbjct 27502 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 27561 Query 16904 TTTCCGGTCAGCGTTTTGACAAA 16926 || ||||| || || || || || Sbjct 27562 TTGCCGGTAAGGGTCTTCACGAA 27584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085867211680