Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq211 623 2e-173 seq16 331 2e-85 >seq211 Length=310440 Score = 623 bits (690), Expect = 2e-173 Identities = 1280/1885 (68%), Gaps = 61/1885 (3%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| | | || |||| || | ||||||||||||||| |||||||| | Sbjct 28602 TGAACTGGATGGGCTGGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTGAGAC 28661 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| || || ||||||| || | ||| ||| ||||| Sbjct 28662 CCAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCAT-----------GGTCGG 28710 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | || | || || |||||| ||||| |||||||| || | | || || |||| Sbjct 28711 C-TCACGCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAACGCACCACGGTCGGCGG 28769 Query 243921 CCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| | | || | | || || ||||| || | |||||||| | | |||| Sbjct 28770 CCATCTGCACAATTGTGCGT-TGCGAGATCTCCCACACAGTCTTGTACAGAGCCTTGGTC 28828 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | |||||| ||||||||| | ||| || | | | |||| || | | Sbjct 28829 TCAGCGGGGATGTTAGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTC 28888 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099 ||||| || ||||||||||| | |||| ||| || ||| | |||||| ||| Sbjct 28889 ATGTTGTCCGACCACAGGCCCATGTCGACCAGGTCCTTGAGCAGCCACGGGTTCACGACC 28948 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159 || ||||| || | |||||| ||||||||||||| |||| || ||||||| || | Sbjct 28949 TGGAACTCGCCGGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCAC 29008 Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTG 244219 || |||||||||| ||||||| || ||| || |||||||| | || |||||||||| Sbjct 29009 TCGTTGTTGCCCAGAATCTGCGAGGTCGACGCCGTGGGCATGGGAGCCATCAGCAGACTG 29068 Query 244220 TTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAG 244279 || | | |||||| || ||| ||| | ||| ||| ||||||||| | || || Sbjct 29069 TTGCGGATACCGTGCTCCTTGATCTTGAGACGGAGGGCGTCCCAGTCCCAGAGACCAGA- 29127 Query 244280 AGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339 || | |||| |||||||||| |||||||| | |||| ||||||||| Sbjct 29128 -------CG-GCTTGACATCCCACATGTCGAACTGCAGGATGCCCTGCGACACGGGGCTG 29179 Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGC 244398 |||||||| | || ||||| || || || |||||| | | | | ||| ||||| Sbjct 29180 CCCTCGTACGACGAGTAGGTGCCCTCAATCTCGGCCAGGTCCGACGACGCAGTC-AGGGC 29238 Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAA 244458 ||||| ||||||||||||||||||| |||||| | |||||||||| | | ||| Sbjct 29239 GGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGGGCCTCGGGCGACTCGAA 29298 Query 244459 GGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCT 244518 ||| |||| || || |||| | || ||||| ||||| || |||| || ||||| | Sbjct 29299 GGGCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATGGGGCG 29358 Query 244519 GTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTT 244578 ||| ||| ||||| | | |||| |||||||||||||| |||||| | ||||| | Sbjct 29359 GTGGCGCATGTTGCTGTTCTTGGCCTCGGGCACGGGGTAGAAGTTGACATCGATGATGCG 29418 Query 244579 GTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTA 244638 ||| ||||||||| | | || ||| ||| |||| || ||||| || Sbjct 29419 GTTCAGGTTGCGGACAACAACCTGGGTGACCTCGTGCAGCTTCTTGAAGTCATA------ 29472 Query 244639 GGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697 || ||||| ||||| | || |||||| ||||| | |||||||||| Sbjct 29473 --GA-CCTCGT---TGGTG-TAGTCGACAAACGACGGCAGGGCCAGCGAAGCCAGGTTGC 29525 Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757 ||||||| ||||| || | | | ||||| ||||||||| ||||| ||||| || Sbjct 29526 AGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATCTCCGTGCACAGGTTGGAGCTGC 29585 Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817 |||||||||||||| || || ||| |||| ||||||| ||||||||| ||||||| Sbjct 29586 GGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGA 29645 Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGA 244877 |||| ||||||||| |||||| |||||| | || ||| || | | ||||| | Sbjct 29646 AGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGGGCCTTAA 29705 Query 244878 CCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGC 244937 | ||| || | |||||| |||||| |||||| |||||||||||| | Sbjct 29706 CGGTCTTGATGCCGCGGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCAC 29765 Query 244938 CCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGT 244997 | || || | ||||| |||||| ||||||||||| |||||||||| | Sbjct 29766 CGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGCGTCCACTCGCCATTCT 29825 Query 244998 CCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCC 245057 || ||| | || |||||| ||||| || ||||| |||||| |||| || || | || | Sbjct 29826 TCTCGACACGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGATCGCGGGCGC 29885 Query 245058 TCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCC 245117 ||| ||| ||| |||||| | ||| || | || || ||||||||| |||||| Sbjct 29886 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGGAACTCGAAGACGTCGGCGTGCC 29945 Query 245118 AGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCC 245177 | ||||| | ||||| | || ||| || || ||||||||||| ||||||| || | Sbjct 29946 ACGGCTCGAGGTAGATACAGAAGGCACCAGGACGCTTGTTGCCACCCTGGT----CAACG 30001 Query 245178 TCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTG 245233 | ||||| | | ||||| | ||||| | || | |||||||| || ||||||| Sbjct 30002 TAGCGAGCAGTGTTATTGAACACACGCAGCATGGGGATGATGCCGTTGGACGTGCCGTTG 30061 Query 245234 GTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCC 245289 ||||| ||||| | |||| | | | || ||| | ||||| | ||| | || Sbjct 30062 GTGCCGGCAATGTACGAGCCCGTCGCAC---GGATGC-GGTGGACGTTGAGGCCGATACC 30117 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 |||||| ||||||||| | |||||| |||||| ||||| |||||||| ||||| Sbjct 30118 GCCGGCCGTCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCAATGCT 30177 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| ||| |||| || || ||||| ||||||||||||| || ||| ||| | ||| Sbjct 30178 GTCGTCCTTGATGTCGACGAGGAAGCACGAGGACAGCTGGGCCTGGGGCGTGCCGGCGTT 30237 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAG 245469 ||| || ||||| ||||||||| ||| | | | || | | | ||| |||| | Sbjct 30238 GAAAAGCGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAT 30297 Query 245470 CAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG 245529 | | || ||||| ||||| ||| | ||| | ||||| |||||||||| Sbjct 30298 GACACGTTCAATGTTATCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGGGG 30357 Query 245530 -CG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586 || || |||| || ||| | |||||||| ||||| |||||||| |||||||| Sbjct 30358 ACGCTCGACGATCTTGCCGTCGAG---CTTGAGCAGATAGGAACGCTCGAGGGTCTTGAA 30414 Query 245587 CCCAAAGTACGAGTAGCCAAAGTCG 245611 ||||||||| |||| |||||| Sbjct 30415 ACCAAAGTACTGGTAGTTGAAGTCG 30439 >seq16 Length=123879 Score = 331 bits (366), Expect = 2e-85 Identities = 618/909 (68%), Gaps = 74/909 (8%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||||||||||||||| ||| Sbjct 3551 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 3610 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 ||||||| | || |||| | || | |||| | |||| | || || Sbjct 3611 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGAGGACGAGCGCTACTTTGTCTC 3669 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| ||||| |||||||||||||| |||||||| ||||| |||||||| | | | Sbjct 3670 GCACATCCTGGCTTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 3729 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 3730 CTTCAGCGGCGAGGTCCAGGTCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 3789 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | || || |||| |||||| ||| |||| Sbjct 3790 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATCGACACCTACATCAAGGACCCCGC 3849 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA------------------------- 42630 | || | | || ||||| ||||| || || | Sbjct 3850 CCGCCGCACCTACCTCTTCAACGCCATTGACACCAGTATGTCCCTCCTCCAGTATTCCAT 3909 Query 42631 ------TGC---------------------CCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 ||| ||||||| |||||||| |||||||| | Sbjct 3910 CTTGATTGCTCCCTGCTAACAGTTTAGTCCCCTGCATTCGCAAGAAGGCCGACTGGGCTC 3969 Query 42664 TCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | ||||||| | | | || | | || || | | || | || || || || | ||| Sbjct 3970 TGCGCTGGATC-ACCGACGAGAAGTCCACCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCC 4028 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781 |||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct 4029 GTCGAGGGTATCTTCTTCTCGGGCGCCTTCTCCTCCATCTTCTGGCTCAAGAAGCGCGGT 4088 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | ||||||||| || |||||||| ||||| |||||| | |||||||| ||||| | Sbjct 4089 CT-GATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACAC 4147 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||||||||| || ||||| |||||| | |||| | | | | ||| ||| Sbjct 4148 CGACTTTGCCTGCCTGCTCTTCTC---CCACCT---GAACAACCGCCCCAGCAAGCAGGT 4201 Query 42902 C---CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT 42958 | || ||| ||| || ||||| |||||||| ||||||||||||| || | || Sbjct 4202 CATTGAGGACATTATCGTCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAGGCCCT 4261 Query 42959 GCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGC 43018 |||| ||||| ||||||||||| | ||||||| ||||||| ||| |||||| Sbjct 4262 GCCCTGCGCCCTGCTCGGCATGAACTCCACCCTCATGAAGCAGTACATTGAGTTCGTCGC 4321 Query 43019 CGACCATCTCCT-GT-GCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTC 43076 |||| || || || ||| | || | | ||||| | | | ||||||| Sbjct 4322 TGACCGCCTGCTCGTCGCC--CTCGGCAACGACAAGGTCTACCGCGCCACCAACCCCTTC 4379 Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136 ||||| ||||||||||||||| | | |||||||||||||| |||||||||||||||| | Sbjct 4380 GACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGC 4439 Query 43137 GACTACCAG 43145 || |||||| Sbjct 4440 GAGTACCAG 4448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334100568320