Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq67 107 5e-18 seq86 104 6e-17 >seq67 Length=72276 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || ||||||| Sbjct 65781 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 65840 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || |||||||| ||||| || ||| Sbjct 65841 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 65900 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| ||| || Sbjct 65901 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACC 65960 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || || ||||||||||| |||||||| Sbjct 65961 TCAAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 66007 >seq86 Length=56920 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||||| || || || || ||||| | || || || || ||| Sbjct 319 TCCTTCTGAATGTTATAGTCGGACAGGGTCCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 260 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| || || || |||||||| |||| || ||||| Sbjct 259 ATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 200 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || ||||| || || || ||||| || || || |||||| Sbjct 199 TCAATGGTGTCGGAGCTC---TCGACTTCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTG 143 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 142 ACGAAAATCTGCAT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179647870612896