Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq211 246 4e-60 seq16 123 3e-23 >seq211 Length=310440 Score = 246 bits (272), Expect = 4e-60 Identities = 1117/1743 (64%), Gaps = 41/1743 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| || Sbjct 28634 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTGGTG 28693 Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | || || || | |||| || ||| | || || || ||||| || Sbjct 28694 ATCTTGCCCATGGTCGG-CTCACGCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAA 28752 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTT 113773 ||||| || || ||||| | | || || | | | | ||| ||||||||||| Sbjct 28753 CGCACCACGGTCGGCGGCCATCTGCA-CA-ATTGTGCGTTGCGAGATCTCCCACACAGTC 28810 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| | ||| | ||||| | ||| || ||||| || || ||| | Sbjct 28811 TTGTACAGAGCCTTGGTCTCAGCGGGGATGTTAGGGATGTTCTGGATCGAACCGCCCTCG 28870 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | ||| | | |||||| | | ||||| || || || | || |||| | Sbjct 28871 GCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCGACCAGGTCCTTGAGC 28930 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || | || || || ||||| || || || || | | | ||||| |||| | Sbjct 28931 AGCCACGGGTTCACGACCTGGAACTCGCCGGCCAGCACACGGCGCTGGTAGATGTTGGAC 28990 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| |||||||| ||||| |||| || || | ||| || || ||||||||| Sbjct 28991 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTCGACGCCGTGGGCATG 29050 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || ||||| || || ||||| |||| ||| | ||| | || |||||||||| Sbjct 29051 GGAGCCATCAGCAGACTGTTGCGGATACCGTGCTCCTTGATCTTGAGACGGAGGGCGTCC 29110 Query 114074 CAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132 ||||| || || | | || | | |||||| || ||||| ||||| || || || Sbjct 29111 CAGTCCCAGA-GACCAGACGGCTTGACATCCCACATGTCGAACTGCAGGATGCCCTGCGA 29169 Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 114192 | || ||||| | | | ||| | |||||||| ||| |||| || || ||| Sbjct 29170 CACGGGGCTGCCCTCGTACGACGAGTAGGTGCCCTCAATCTCGGCCAGGTCCGACGACGC 29229 Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 114252 ||||| ||||| || || ||||| || || | || | | ||||||| Sbjct 29230 AGTCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGGGCCTCGGG 29289 Query 114253 GGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311 || || || | | || || | | || |||| || ||||| |||||||||| | Sbjct 29290 CGACTCGAAGGGCATGCG-CAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACAC 29348 Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCC 114368 |||| ||||| || | ||| || | ||| | | ||| |||||| || || || Sbjct 29349 CAATGGGGCGGTGGCGCATGTT-GCTGTTCTTG--GCCTCGGGCACGGGGTAGAAGTTGA 29405 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 |||||| | | || || || | ||||||| |||| || || ||||| | | Sbjct 29406 CATCGATGATGCGGTTCAGGTTGCGGACAACAACCTGGGTGACCTCGTGCAGCTTCTTGA 29465 Query 114429 AATCAAA-ACTGCGA--GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 114485 | ||| | || || || | || |||| || || ||||| | || ||||| | Sbjct 29466 AGTCATAGACCTCGTTGGTGTAGTC---GACAAACGACGGCAGGGCCAGCGAAGCCAGGT 29522 Query 114486 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 114545 | || || | | |||||| | | |||||| | ||| ||||| |||| || || | Sbjct 29523 TGCAGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATCTCCGTGCACAGGTTGGAGC 29582 Query 114546 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 114605 | |||||||||| |||||| || || ||| ||| || |||||||| |||| Sbjct 29583 TGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCA 29642 Query 114606 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCT 114664 || | || | || ||||| || |||| || ||| || || | ||| | | || | | || Sbjct 29643 TGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGGGCCT 29702 Query 114665 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 || || | || | || ||||||| |||||||||| ||| || || || ||||| Sbjct 29703 TA-ACGGTCTTGATGCCGCGGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCG 29761 Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 ||||| | || | || || || || | ||||| | ||| | ||| | ||| Sbjct 29762 TCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGCGTCCACTCGCCA 29821 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 || ||| |||||||||||||| ||||| || ||||| || || ||| ||||| || Sbjct 29822 TTCTTCTCGACACGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGATCGCGG 29881 Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904 ||| | || || | || || || |||| || | || || | || || ||| Sbjct 29882 GCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGGAACTCGAAGACGTCGGCG 29941 Query 114905 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTT 114958 |||||||| || ||||| | || | || | |||| ||| |||||| Sbjct 29942 TGCCACGGCTCGAGGTAGATACAGAAGGCACC---AGGACGCTTGTTGCCACCCTGGTCA 29998 Query 114959 ACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 115018 || || | || ||| ||| || || || ||||| || ||||| || | || ||| Sbjct 29999 ACGTAGCGAGCAGTGTTATTGAACACACGCAGCATGGGGATGATGCCGTTGGACGTGCCG 30058 Query 115019 TTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATAC 115076 || || || || |||||| | | || | || |||| || | || |||| Sbjct 30059 TTGGTGCCGGCAATGTACGAGCC--CGTCGCACGGATGCGGTGGACGTTGAGGCCGATAC 30116 Query 115077 CCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCG 115136 | || ||| ||| ||||| |||||| | |||| || ||||||| || || || Sbjct 30117 CGCCGGCCGTCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCAATGC 30176 Query 115137 AGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCG 115195 ||| |||| | ||| |||||||| |||| || ||||| || || || ||| Sbjct 30177 TGTCGTCCTTGATGTCGACGAGGAAGCACGAGGACAGCTG-GGCCTGGGGCGTGCCGGCG 30235 Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTC 115254 ||||| || || || | |||||| |||| | || | | |||||| | | ||||||||| Sbjct 30236 TTGAAAAGCGTGGGCGAGGCGTGGGTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTC 30294 Query 115255 CAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG 115314 | ||| ||||| || || || |||| | ||| ||||| | ||||| || Sbjct 30295 AATGACACGTTCAATGTTATCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCTG 30354 Query 115315 GGG 115317 ||| Sbjct 30355 GGG 30357 >seq16 Length=123879 Score = 123 bits (136), Expect = 3e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || ||||||||||| |||||||| || || |||||| ||| || Sbjct 4157 GGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCC 4098 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| |||||||| | |||||| || | | || | |||||||||||||| Sbjct 4097 GGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGAGAAGGCGCCCGAGAAGAAGAT 4038 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| || ||||| |||| |||||||| ||||||| Sbjct 4037 ACCCTCGACGGCAGCGAAAGCAACGAGACGCTGGGCAAAGG 3997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350374290560