Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq390 93.3 4e-14 seq86 86.0 6e-12 seq67 84.2 2e-11 >seq390 Length=196699 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 27366 ACCACCGCGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 27425 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || ||||||||||| || |||| || ||||||||||| || || Sbjct 27426 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCTGGGGG 27485 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || || || || Sbjct 27486 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 27545 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | |||||||||||| | || || ||||| Sbjct 27546 CTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 27584 >seq86 Length=56920 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | || || || || | || || || || |||||||| || || | Sbjct 355 CCGCCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAC 296 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| ||||||||||| ||| | || || ||||||||||| || || Sbjct 295 AGGGTCCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 236 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || | || ||| Sbjct 235 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCGGAGCTCTCGACT 176 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || |||||||| ||||| Sbjct 175 TCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCAT 129 >seq67 Length=72276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | | |||||| |||| || ||||||||||| ||| | Sbjct 65817 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAG 65876 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || |||||||||||||| || || || || || || || || || ||| ||| Sbjct 65877 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 65936 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | ||||| || | || | ||| || || || | || || ||| Sbjct 65937 TCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTACCCGTGAGGGTCTTGACG 65996 Query 64433 AAAATTTGCATTTT 64446 ||||| ||||| || Sbjct 65997 AAAATCTGCATCTT 66010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642101918080