Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq211 369 4e-97 >seq211 Length=310440 Score = 369 bits (408), Expect = 4e-97 Identities = 1109/1676 (66%), Gaps = 46/1676 (3%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || || ||| || || || |||||| | || ||| Sbjct 30432 AACTACCAGTACTTTGGTTTCAAGACCCTCGAGCGTTCCTATCTGCTCAAGCTCGACGGC 30373 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | |||||| || || || || | ||||| ||||| |||| || ||| | Sbjct 30372 AAGATCGTCGAGCGTCCCCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGAT 30313 Query 93835 GACATGCCGAATGTTT--TGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 |||| ||| || | | | | | || ||||| ||||| | ||| | Sbjct 30312 AACATT--GAACGTGTCATTGAGACCTACAACTACATGTCCAACAAGTTCTTCACCCACG 30255 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || | || || || |||||||| || || || | | ||| |||| ||||| ||||| Sbjct 30254 CCTCGCCCACGCTTTTCAACGCCGGCACGCCCCAGGCCCAGCTGTCCTCGTGCTTCCTCG 30195 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | ||||| |||| ||| || || | ||||| |||||| || || | Sbjct 30194 TCGAC-ATCAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGACGTGCGCCATG 30136 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || ||||| ||| |||||| | | ||||| | ||| || Sbjct 30135 ATCTCCAAGACGGCCGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCGACGGGCTCG 30076 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||| ||||| ||||| ||||||||| || |||| ||||| || || ||||| Sbjct 30075 TACATTGCCGGCACCAACGGCACGTCCAACGGCATCATCCCCATGCTGCGTGTGTTCAAT 30016 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| ||||||||||| | | | ||| | ||| |||| Sbjct 30015 AACACTGCTCGCTACGTTGACCAGGGTGGCAACAAGCGTCCTGGTGCCTTCTGTATCTAC 29956 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 |||||||| |||||||| ||||| | ||| |||| ||||| |||||||||||||| Sbjct 29955 CTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTCGATCTGCGCAAGAACCACGGCAAG 29896 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || || | ||| | || || ||| || || ||| | || ||||| || ||||| Sbjct 29895 GAGGAGGTCCGCGCCCGCGATCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGAAG 29836 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || |||||||| || || |||| || | || || || || || || || ||| | Sbjct 29835 CGTGTCGAGAAGAATGGCGAGTGGACGCTCATGTGCCCTAACGAGTGCCCTGGCCTGGCT 29776 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG-CAAGG 94429 ||| | || | || || || || |||| | ||||| | |||| | || Sbjct 29775 GACTGCTACGG-TGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCCGCGG 29717 Query 94430 C--CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | || || |||| | || |||||||||| | ||| | || | ||| || Sbjct 29716 CATCAAGACCGTTA---AGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGA 29660 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| || | |||| ||| ||| |||||| | ||| |||| |||| ||||||| || Sbjct 29659 GACCGGCAACCCCTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGA 29601 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || ||| ||||| || |||||||| |||||||||||||| | | || | Sbjct 29600 ACCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATTGTCGAGTACTCGGCCCCTG 29541 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCC 94665 | ||| | || || || ||||||| || | |||| | | || || ||| | || Sbjct 29540 ATGAGGTCGCCGTCTGCAACCTGGCTTCGCTGGCCCTGCCGTCGTTTGT-CGACTACACC 29482 Query 94666 TAC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT 94724 || | ||||| |||| | ||| | ||| || | | | || | | || Sbjct 29481 AACGAGGTCTATGACTTC-AAGAAGCTGCACGAG---GTCA----CCCAGGTTG--TTGT 29432 Query 94725 CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784 | ||||||||| | | ||||| |||||||||||||| || ||||| ||||| Sbjct 29431 CCGCAACCTGAACCGCATCATCGATGTCAACTTCTACCCCGTGCCCGAGGCCAAGAACAG 29372 Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844 ||| || || || ||||| || |||| ||||||||| | || || || | || Sbjct 29371 CAACATGCGCCACCGCCCCATTGGTGTCGGTGTCCAGGGTCTGGCTGATGCCTTCCTGGC 29312 Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATTCGAAA 94903 |||| |||||| ||| || ||| | | ||| | | || | | || ||||| | Sbjct 29311 TCTGCGCATGCCCTTCGAGTCGCCCGAGGCCCGCGAG-CTCAACAAGCAGATCTTCGAGA 29253 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTC-CACTTGGCC-AGATCGGACGGCGGGCC 94961 ||| || ||| ||| ||| | |||| || ||||| |||| || ||| | Sbjct 29252 CCATCTACCACGCCGCCCTGACTGCGT-CGTCGGACCTGGCCGAGAT-TGAGGGC-ACCT 29196 Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 || || |||| | || ||| || |||||||| | ||||||||| | |||| Sbjct 29195 ACTCG--TCGTACGAGGGCAGCCCCGTGTCGCAGGGCATCCTGCAGTTCGACATGTGGGA 29138 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCA---AACA 95078 ||| ||||| || ||||| | |||||||| || || || || | | |||| | || Sbjct 29137 TGTCAAGCCGTCTGGTCTCTGGGACTGGGACGCCCTCCG-TCTCAAG--ATCAAGGAGCA 29081 Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138 |||| | ||| ||||| |||| |||||||||||||| || || ||||||| || Sbjct 29080 CGGTATCCGCAACAGTCTGCTGATGGCTCCCATGCCCACGGCGTCGACCTCGCAGATTCT 29021 Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198 ||||||||||||| ||||| |||| ||| |||||| | ||| | | || ||||| || Sbjct 29020 GGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGCCGTGTGCTGGC 28961 Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGT 95257 ||| || |||| ||| | ||| | || || |||||| | || | |||| ||| Sbjct 28960 CGGCGAGTTCCAGGTCGTGAACCCGTGGCTGCTCAAGGACCTGGTCGAC-ATGGGCCTGT 28902 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || ||||| | ||||||| | | || ||| || ||||||||||||| Sbjct 28901 GGTCGGACAACATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCTA 28842 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || || | || | |||||| || |||||||| |||||||||||| |||| ||| Sbjct 28841 ACATCCCCGCTGAGACCAAGGCTCTGTACAAGACTGTGTGGGAGATCTCGCAACGC 28786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720528494720